Gene Hhal_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1172 
Symbol 
ID4710268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1279248 
End bp1279715 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID639855645 
ProductDoxX family protein 
Protein accessionYP_001002749 
Protein GI121997962 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACGG CGCGAGATCT GCTTTTTGGG GGTGTGGCTC CGACCACGCT GGTGGCCGAT 
GCCGGGCTGA CCGCGCTGCG GATCGGCGCC GGTTTGATGA TGGCCGTCGG CCACGGCCTC
CCCAAGATCC CTCCGCAGGA GGGGTTCGTC GGCATGGTGG AGGGGCTCGG CCTGCCCCTG
CCGCTGTTCT TTGCCTGGCT GGCCGGGGTT GCCGAGTTCT TCGGCGGCCT GCTGCTCGCC
GCCGGTCTGC TCACCCGTCC CGCTGCGGCC GCGATCCTCG GCACCATGCT GGTGGCCGCC
TTCGGGGTGC ACTTCGCTGC GGGTGATCCG CTGTTTGCCG TCGATGGCCC GAGCGCCGAG
ATGGCCGTGC TTTACGCGTT CGTCGCCCTG GCGTTCATGC TGGTCGGCTC CGGCCGGATC
GGTATGGACC ACCTGGTGCG GGAGCGTTTC GCGCGGCTGA TACCCTGA
 
Protein sequence
MQTARDLLFG GVAPTTLVAD AGLTALRIGA GLMMAVGHGL PKIPPQEGFV GMVEGLGLPL 
PLFFAWLAGV AEFFGGLLLA AGLLTRPAAA AILGTMLVAA FGVHFAAGDP LFAVDGPSAE
MAVLYAFVAL AFMLVGSGRI GMDHLVRERF ARLIP