Gene Hhal_1169 details

Gene Information

• Locus tag: Hhal_1169
• ID: 4710160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1276460
• End bp: 1276984
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639855642
• Product: putative cytochrome c
• Protein accession: YP_001002746
• Protein GI: 121997959
• COG category: [C] Energy production and conversion
• COG ID: [COG3245] Cytochrome c5

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGTGC GGTACTGGAT GTTGGCGCTG ATGGCGGCGG GGCTGCTGGC CCTGGCCGGT 
TGCAACGATT CGTCCGCCCC GGACGAAAGC CCCGAAACGG ACGAGCAGGG GGAGGCCTTC 
GAGGCCGCAG AGGATCCGAT GGAGGCCGCC CAGGAGGACG CGGCACCCCC GGCGGAGGCC 
GATCATAACG GCGTCGCTAC CGATGATACC GCCCGGGCCG AAGAGGAGGC CGTGGCACAG 
CCGGTGGCCA GTCACGCCAA TGAAGACAAC GAAGACCATC CCGGACTGGC CATCTACCGC 
AGCGGCACGG CACCCAGCTG CCGCTCGTGC CACGACCGCG GGATTGCCGG GGCTCCGGTG 
ACCGGCCAGG AAGCGGACTG GGCCGACCGC TCCCGCGATC TGGACGAGCT GCTCGACGCG 
ACCCTGCGCG GTAAGGGGGC CATGCCGGCC TACCGCGGAC GGGCCGACGA GGACGACCTG 
ATCAAGGCCA TCGAATACAT GCTCTCCACC CTTGAGGACG CATGA 

 

Protein sequence

MHVRYWMLAL MAAGLLALAG CNDSSAPDES PETDEQGEAF EAAEDPMEAA QEDAAPPAEA 
DHNGVATDDT ARAEEEAVAQ PVASHANEDN EDHPGLAIYR SGTAPSCRSC HDRGIAGAPV 
TGQEADWADR SRDLDELLDA TLRGKGAMPA YRGRADEDDL IKAIEYMLST LEDA