| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1076 |
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| Symbol | |
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| ID | 4709868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1170499 |
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| End bp | 1171833 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855547 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001002654 |
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| Protein GI | 121997867 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0571583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCT GGCGCGACGG ACTCACCCAG GTACGACGCT ACCCTTCGGC CGTGGTGGGG
CTGCTGATCA TCGCCATGCT GCTCGCCACC GCGGTCTACG CCGTCACCGC CATCCCCTAC
TCCGAGGCGC AGAAGCTCTG GCGCGGCGGC GATGCCTGGC AGGATCTGCC GGTCAACGCC
AGCCCGGCAT GGACCGATCG GCTCTTCGGT GGCGAGGCGC CGCGCACCAT CACTGCCTCC
AGCGACGACG CGCCCACCGA GACCCAGGAC CTGGGCGCGG CCCGGCTCGA GACCACCACC
CTCAAGGTGG ACTTTCCGTA CGACGATTTC CCTTCGGAGA TCAACCTGTT CCTCGAGGCG
GAGTTCGAGG AGGGCCAGCC CTTTGCACGG GTCTACTGGC GCACCCCGGA CGGCCAGGAG
ATCCCCATCG ACGCCCGGCG GATCGGCGAG CGGGAACGCT TCTCGATCTC CCAGGACCGG
CAGCTGGAAA GCCGGCTGGG CTTCCCGCCC CAGGTCGGCC TGTTCACCGA CGCCGAGCCC
GGCACGCCGA ACCCGGTGGT GCGCGGCGGC ACCTACGAGT TGATCATCGA GACGGTGCAC
TTTGAGGAGT TGGCCCGGAT GCACGCTGAC CTGGTCGTCT ACGGGCAGGT CCACGGCGCC
TTCGGCACCG ACCACCAGCG CCGCGATCTG GCTGTCGCCC TGCTCTGGGG CACACCGGTG
GCGCTGGCCT TTGGGCTGCT GGCCGCCGTC GGCACCACGA TCACCACCCT GATCATCGCC
GCCACCGGGG TCTGGTACGG CGGCTGGGTA GACGCCACCA TCCAGCGGCT CACCGAGGTG
AACATCATCC TGCCGCTGCT GCCCATCCTG GTGATGATCG GCACCCTCTA CTCGACCAGC
ATCTGGCTGA TGCTCGGCGT GGTGGTGGTG CTGGGCATAT TCAGCGCCGG GATCAAGATG
TACCGCTCCA TGCTCCTGCC CATCCGCCAG GCACCCTACA TCGAGGCAGC CCGCGCTTAC
GGGGCCAGCG GCGGGCGGAT CATCCTGCGC TACATGGTGC CGCGGATCCT GCCGGTACTG
ATCCCGACCT TCGTGACCCT GATCCCCACG TACGTCTTCC TGGAGGCGTC GCTGGCGGTC
CTCGGCCTGG GTGACCCGGT GCTACCGACC TGGGGCAAGG TCCTCCACGA CGCCCAGGCC
CAGAGCGCGC TCTACCACGG GTTCTACTAC TGGGTGCTGT CACCGGCGGC GCTCTTGATG
CTGACCGGGC TCGGCTTTGC CATGCTCGGC TTTGCCCTGG ACCGGATCTT CAACCCGCGG
CTGAGGAGCA TCTGA
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| Protein sequence | MIRWRDGLTQ VRRYPSAVVG LLIIAMLLAT AVYAVTAIPY SEAQKLWRGG DAWQDLPVNA
SPAWTDRLFG GEAPRTITAS SDDAPTETQD LGAARLETTT LKVDFPYDDF PSEINLFLEA
EFEEGQPFAR VYWRTPDGQE IPIDARRIGE RERFSISQDR QLESRLGFPP QVGLFTDAEP
GTPNPVVRGG TYELIIETVH FEELARMHAD LVVYGQVHGA FGTDHQRRDL AVALLWGTPV
ALAFGLLAAV GTTITTLIIA ATGVWYGGWV DATIQRLTEV NIILPLLPIL VMIGTLYSTS
IWLMLGVVVV LGIFSAGIKM YRSMLLPIRQ APYIEAARAY GASGGRIILR YMVPRILPVL
IPTFVTLIPT YVFLEASLAV LGLGDPVLPT WGKVLHDAQA QSALYHGFYY WVLSPAALLM
LTGLGFAMLG FALDRIFNPR LRSI
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