Gene Hhal_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1038 
Symbol 
ID4709778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1121075 
End bp1121716 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID639855509 
Producthypothetical protein 
Protein accessionYP_001002616 
Protein GI121997829 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGGA TTGGCGGGAT ATTCCTCAAG GGGCTGCTGG CCGTCCTGCC GGCAGTCGTC 
ACCCTTTATC TTCTCTACTG GCTGATCATC ACCGCCGAGC GGGCGCTCGG CAGCATCGTC 
CAGCTTGTCA TCCCCGAGAC CTGGTACCAC CCCGGCCTGG GTGTCGCCCT GGCGGTGGCC 
GGCATCTTCG CCATCGGCGT GCTGCTCAAT TTCTATCTCC TGCGCCGCCT GTGGGAGTGG 
TTCGAACAGA TCCTCCTGCA GCTCCCGGTG GTCAAGACCA TCTACGGCGC CGTGCAGGAT 
CTCACCGGGT TCGTCTCCCG TGCCGAAGAG TTGGGTGACC AGGTGGTCAC GGTGCCGCTG 
CCCGGCAGCG ACTACCGGGT CCTCGGCGTG GTCACCCGCA GACAGTGGGA AGGCGTGGCC 
GAGGGGCTGG GCGACGAGCA CACCATCGCC GTTTACACCC CGATGAGCTA TCAGGTGGGT 
GGCTACACGC TGCTGGCGCC GGCCTCCGTG GTCGAGCCGG TGGACATGAG TGTCGAGGAC 
GCCATGCGGT TTGCGGTGAC CGCGGGCATG TCGACCCGCA AGAGCGCCTC CCTCGACGAA 
CTGCTCGAGG ACTCGGCACA CGACCCGGGC AGGGAGGGGT AG
 
Protein sequence
MRRIGGIFLK GLLAVLPAVV TLYLLYWLII TAERALGSIV QLVIPETWYH PGLGVALAVA 
GIFAIGVLLN FYLLRRLWEW FEQILLQLPV VKTIYGAVQD LTGFVSRAEE LGDQVVTVPL 
PGSDYRVLGV VTRRQWEGVA EGLGDEHTIA VYTPMSYQVG GYTLLAPASV VEPVDMSVED 
AMRFAVTAGM STRKSASLDE LLEDSAHDPG REG