Gene Hhal_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1017 
Symbol 
ID4709595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1088580 
End bp1090010 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content71% 
IMG OID639855488 
Productglutamate--cysteine ligase, GCS2 
Protein accessionYP_001002595 
Protein GI121997808 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.22607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACAGG AGATCGGTCG GGCACGGTTC GGGAGCGATG ACTTCAGCGC CTTTCGTCAG 
CGGCTCCGGG CGGAGACCCG ATTGCTGGGC GAGTGGTTGC GAGCCGGTCG GGTGGCCGAG
GGCCCGCCGA GCATCGGCCT GGAGCTGGAG GCGTGGTTGG TGGACGCCGA CGGCCGTCCG
GCCCCGATCA GTGATCGGGT GTTGAGCCGG GTCGAAGACC CTCGGGTTGA GAACGAGCTG
GCCCGGTTTA ACCTGGAGAT CAACACCGAC GTTCACCCGC TGGCCGGAAC GCCCCTGCAG
GGGCTGCAGA CGGAGCTCGC CGAGCGCTGG GCGCGGACGC AACGGGCCGC GGCCGACGCC
GGGTGTCGGT TGGCACTGGT CGGCATCCTC CCTTCGGTGC GCGAGGCGGA TGTCTGCGTC
GAGAACATGA CGCCCTCGCC CCGCTACGCG GCGTTGAACG AACAGGTCCT GGCGCTGCGC
GGGCGTCGCC CGCTGACCCT CGACATCGAG GGGACGCAGC GCTTTCGCAC CGAGCGCCAC
GACGTCATGC TCGAGGCGGC CACCACCTCC CTACAGCTGC ACCTGCAGGT GCCGCCGCAG
CGCATGGCGG CATTCTTCAA CGCCGCGGTG GCGTTGTCGG CCGCTTCGGT GGCGGTGGCG
GCCAATTCGC CGTTCCTGTT CGGTCGCCGC CTGTGGCACG AGAGCCGTAT CCCGCTGTTC
GAACAGGCGG TGGCGTGCAC CCGCCTGGAG CCGCGTGGGG CCGGGACCCT GGCGCGGGTG
GGCTTCGGCA GCGGCTACGC CCGCGACGCC CTGTACGGCT TCTTCGTCGA GAATCGGCAG
CACCACCCGG TCTTGTTGCC CGAGTTGCAG GATCAACCGG TGGAGGCGCT GGCCCATCTG
CGCCTGCACA ATGGGACCAT CTGGCGCTGG AACCGGCCGC TGGTGGAGGT GGTCGACGGG
CAGTGCCAGC TGCGTCTGGA GCACCGGGTG ATGGCGGCCG GTCCGACCCT GGCCGACGTG
CTGGCCAACG CCGCCTTCTT CTATGGCGCC GTGGCCGAGC TGGCTGAGTC GCGCCCGGGG
CTGGTCGAGG AACTGCCTTT CCACATCGCC GAGCAGAACT TCTACGCCGC GGCCCGTTAC
GGTCTGGAGG CCGAGGTCGA GTGGCTGGAT GGCTGGTTCG GCCGGCTGGG CGATCTCGTT
ACCGAACGCC TGCTGCCCAA GGCCCGCCGC GGGCTGGTAC GGGCCGGGGT GGCGGAGGCG
GAAGCCACGG CGCACCTGGG CGTGCTGGAG GAGCGGGTTG CCAGCGGTCG GACGGGCGCG
GCCTGGCAGC TGGCCTGGGT GGAGCGCCAC GGTGAGGACG ACCAGGCGCT GACCCGGGCC
TACCTGGATC GGGCCGCCGA CGGCGAGCCG GTCCACCGCT GGCCGCTGTA G
 
Protein sequence
MGQEIGRARF GSDDFSAFRQ RLRAETRLLG EWLRAGRVAE GPPSIGLELE AWLVDADGRP 
APISDRVLSR VEDPRVENEL ARFNLEINTD VHPLAGTPLQ GLQTELAERW ARTQRAAADA
GCRLALVGIL PSVREADVCV ENMTPSPRYA ALNEQVLALR GRRPLTLDIE GTQRFRTERH
DVMLEAATTS LQLHLQVPPQ RMAAFFNAAV ALSAASVAVA ANSPFLFGRR LWHESRIPLF
EQAVACTRLE PRGAGTLARV GFGSGYARDA LYGFFVENRQ HHPVLLPELQ DQPVEALAHL
RLHNGTIWRW NRPLVEVVDG QCQLRLEHRV MAAGPTLADV LANAAFFYGA VAELAESRPG
LVEELPFHIA EQNFYAAARY GLEAEVEWLD GWFGRLGDLV TERLLPKARR GLVRAGVAEA
EATAHLGVLE ERVASGRTGA AWQLAWVERH GEDDQALTRA YLDRAADGEP VHRWPL