| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0928 |
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| Symbol | |
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| ID | 4710251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1002505 |
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| End bp | 1006188 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639855397 |
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| Product | hypothetical protein |
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| Protein accession | YP_001002506 |
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| Protein GI | 121997719 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.261917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCGGC CCACGGTAAC CGCCAATGGC CGCACCCTGG TGCACGCTGG CTCCGGGGGC
GAGTTGCTGA CCACCGACGT CTGCCGCACC ACCGTCGGCA GCTCGACGGT GTCGATCCCG
TACCTCAATG TGGCCGAGTC GCGGGACGCC GCGGAGACCG CCCGAACTGT CTTCGTCGAG
GGGCACCCGG TCTGCACCGA GGCCTCGCAG TTCGCCCGCT CCCGGGGCGA CGAGGGGGGT
GATCAGGGCG GGACCGTTTC CGGCACCATC ACCGGTCCGG CGACCTTCCT GCCCGGCAGC
GGCTCGCCGG ACGTCTTCGT CGAGGGCGTG CCGGTGGCTC GAGCCCTCGA CGCCATGGTG
GCCAACCACG AGAACACCCC GCCGGCCCCG CTGCTCCAGG AGCAGCTCCC GCCCACCACC
CTGACCGGCG GCGATCCGCC GCCGGACGCC GAGCCACGAC CGCGGACGCG GATCGACATC
GGTGGCGGGC CGCAGGCCCC GCTCCCCGGC GAGGTGGTGG TCGAGCCGGC GTCGGGCGGC
TGGCACCGCA GCCGGGCCCT ACGCTGGAGC CACCACGACG GCGAGCGGTG GGGAGCCGCC
ATCGAAGAGC TCCCCGAAGG GACCGAAGCG CTGCAACTGA GCCTGATCGA CGCCGACCGG
CGTCACCACC TCTGCAAGGT CCCGCTCACC CGCGGGGCCG AACAGCCGGC GTGGCTGCCG
GGGGAGGAGC CCGAGGTCTC CCCGCCGACG GTCCTGATCC CGACGCTGGT GCGCTTCGCC
CGGGACGCCG AGCTCCGCCA CCGCGACGCC GGCTTCGGCT TCGGGGGGTG GCTCTACCTG
TTCCGTCGGG AGGGGGATCG GCGCTACCTG TGGCGTGAGT GCTATGTCCA CCCGCGTGGC
CGCCTCCACG AGGTCAACCT GGCCTACGAG CACGGCGACC TGCGCCGGCC CACCGGTGAT
GGGCGGCCGA TGCTGCTCCT GCCGCTGCGC ATCGGCGGCG AGCCGGTGGT CCTGGAGGGG
CTGTTTTCTG CCGTCCAGCT CCCCTGGGCG CGCATCGCCG CCGCCGGCGG GCTGGCCCCC
GACGATCCCC GGGCCGGGGT ACACGGTGAA CCGGACGGCG CCGCCGAGCC ACCCCCCGAG
GCGCGCTTCT TCCCCATTGA GCTAACCGAA GACCCCGACA CCGGGCCCGG GGCGGCCGGC
CGCCTCGGGG GGAGTGGCGC CTTCCGCGAC GCGGTGGCGG AAGAAGGCGA ATCCGAGCCG
GTCCGCGAGG ATCTCGCCCC CTACGCCGAG GACGGTCTGG CATTGCTCTA CCTCGACGAC
CCCCTGGGCG AGGCGCGCGG GTTGGCCCAT GAGCAGGCGG CGCTGGCGGA TCGACTCGAG
ACGCTGGTCG CCGGGCTGCA GACCGGCACC AATCCGGAGC GAAGCACCGT CGGCGAAGGG
GAGGGCGATC CGCAGCAGCC CGACGAGCAA TGGCTGGCGG CGGCCGAATC CCTCCACGCC
GTGGCGGCGG GCACCTTTCG TCTGGCCTTC GTCGAGGAGC GCCTGGGGCC CGGCGAGCAA
CCGCCCGACC GCGAGCTGCT CGAGCGCCTG CTCGGTGTCG CCGAACGCAG CGAGATCCGC
GCCGAGATTC GCCGGGTGCG CCGCAAGCGC TTGGCGCTGC TCAGTAGCCA ACGTTACGCC
GATGCCTTGG CCGACTACGC CGGCAACACC CCGCGCCGGG TCTTCGAGGG ACTCGCCGCC
CTGGGCGCGC ACTTCCGGGA GCTGGCCGTG CCGGCGGACA CCGCCGACGG TTACATCGGC
GACATCCCCG CGGCCGAGGG CGAGGCGGAG GCCGCAGAAC TGGATCAGGC CCGCGCGCTG
CTGCGCACCG TCCTGGAGGC CGAGGGTGAT CCCTCCGGGC TGGCCCGGGT CGCCGCCCGG
TTGTTGGCGG CCGAGCCGCT GACCCTGGGC GCCGGGGCGC GGGGCGGCGG CTTGCCCCGG
CCGCGCCGGG AGCTGGAGCT GCAGCTGGCG GCGGCGCCGC GGCGTCTCCA GGCAGTGGAG
CGTTGCTGCG ACCTGGCCGA GCAGCGCCGT GCGGTGACCG CCGAGGACGC GGCGGAGGTC
CTGTACGTGT TGCTGTCGAC CTTCGCCGAG TCGGTGAGCT ATCAGGGCGA CGCCCTCGAG
CACGTCATGC GCATCACCTG CCGCTTCCAG GAGCTGCCCG GTCTGGCCCT GCTGGCGGGG
TTGGAGGTGA CCACGGTCAG CTACCCGGCG CCGGACTTCG ACGGCGTCCC GCTGGCCGAA
ATCCAGCGCC GCGCCGGAGC GCCTACGGGA GGCGAGGCGC GCACCCTGCG GATCGAGCAC
CAGGGCTACG AGCGGCGCTT CCGCATCCTC GCCGCCGGCA GCGACGACTA CCACGCCGCC
GTGGCCGATG CCGGCCGCGG CCCGGTGCAG GTCCTCGGCA GCCCCCTCAC CGCCGAGCTG
CGCATCGAGG ACGAGATCCG TGTCCGCGAA CTGCGTTCCA CCCGCCTGCC GGAGGGTCGC
CTGGCCGACC TGGCCGAGCG CCTCTCCACC AGCTCCGGCG GCCACGCACT GCGCAGCGTC
TTCGGCGCCT TGGAGCTCAT CAACCTCAAC CAGGCGGTAC GCCAGACCCG TACCGAGGCC
TGGTACCACA TCGCCAGCGC CGTCGCCTCC TCCCTGACCC TGGCGGAGCT GCTCGCCCAG
ACCCGGCTCG CCTATCTGAA GCCACGGATT CCGGTGGGGG ATCCGAGGTA TGGGCGTATC
GAGCGGTTGG GATTACGGGC GCAAGTGCTT GGTGGTGCAG CCGCTTTCGC AAGCGCGATC
TATGCCGCGG GCCGCGGCTA CAGTCGATCC TCACGTGGTG ATGAGGTAGC CAGCCGGACG
TGGTTCGTGG CGGGGTTAGC TTACCTGGGT GCGGGTGGCT TCTGGCTTGC GGGTAGCGGA
GGTGTTGGTC TGTCGTTTCT CTTGGTAGCC GTCGGTGCGT CGGCTATAGC GGGCTATGTT
TCAGATACTT CGTTTGCCGA TTTCTGTCGC AATGGCCCCT TTACCCCAAC AGCCCGGGAG
CGGCTGGGTG GCTCGGACCG GGATTCGGGG TGGGCCTGGG TGGCCCGGGC GGTGGAGGTG
GGGCCACCGG TGCAACGGCC CGCCGAGACC GGGAGCTGGG ACGACTGGCC GGCGGTGGCC
GCCTGGTGGC AGCGCGTCCT GCACCGCCCG CCGCTGCGGG TGGCCGCCGA GTACAGCCAG
CAGCTGGGCG GCCGGGGCGC CCTGCGCCAG GTCCGCCTGA CCCTGGCGGG GGTGGCGTGG
CGGCGGGACC GCCTGGAGTG TCGGGTGCTG CTCTGCCCGG AGGACGGTGC CTGCCAGGAG
GTGACCCCGC TGCCTCCAGC GTTCATCAAG GCGGCGCCGG GGGAGGGCTC CGACGCCCTC
ACGGTAACCC TCGCCTGGGA CGCCCTGCCG ACGGCCCCGG GGTGGCGCGG CGAGCTCTGC
TTCCTCATCC GGCAGCGGGC GGTAGCCGGC GCCGGTGACG ACGCCCTGCC GGAGCCCGAG
GCCGACGGCA CGCCCCGCTA CTGGGTGGCC CGGGTGCCCG TGCCCGCCTG GCAGGGTCGG
GCCAAGGCGG CGGTGGCGCC CCGTGCGCTG ACCGTGGACG AGGTGCTCAG GGAAGAGGCG
GCCGGGAGCC GGTCGCAGGG GTGA
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| Protein sequence | MTRPTVTANG RTLVHAGSGG ELLTTDVCRT TVGSSTVSIP YLNVAESRDA AETARTVFVE
GHPVCTEASQ FARSRGDEGG DQGGTVSGTI TGPATFLPGS GSPDVFVEGV PVARALDAMV
ANHENTPPAP LLQEQLPPTT LTGGDPPPDA EPRPRTRIDI GGGPQAPLPG EVVVEPASGG
WHRSRALRWS HHDGERWGAA IEELPEGTEA LQLSLIDADR RHHLCKVPLT RGAEQPAWLP
GEEPEVSPPT VLIPTLVRFA RDAELRHRDA GFGFGGWLYL FRREGDRRYL WRECYVHPRG
RLHEVNLAYE HGDLRRPTGD GRPMLLLPLR IGGEPVVLEG LFSAVQLPWA RIAAAGGLAP
DDPRAGVHGE PDGAAEPPPE ARFFPIELTE DPDTGPGAAG RLGGSGAFRD AVAEEGESEP
VREDLAPYAE DGLALLYLDD PLGEARGLAH EQAALADRLE TLVAGLQTGT NPERSTVGEG
EGDPQQPDEQ WLAAAESLHA VAAGTFRLAF VEERLGPGEQ PPDRELLERL LGVAERSEIR
AEIRRVRRKR LALLSSQRYA DALADYAGNT PRRVFEGLAA LGAHFRELAV PADTADGYIG
DIPAAEGEAE AAELDQARAL LRTVLEAEGD PSGLARVAAR LLAAEPLTLG AGARGGGLPR
PRRELELQLA AAPRRLQAVE RCCDLAEQRR AVTAEDAAEV LYVLLSTFAE SVSYQGDALE
HVMRITCRFQ ELPGLALLAG LEVTTVSYPA PDFDGVPLAE IQRRAGAPTG GEARTLRIEH
QGYERRFRIL AAGSDDYHAA VADAGRGPVQ VLGSPLTAEL RIEDEIRVRE LRSTRLPEGR
LADLAERLST SSGGHALRSV FGALELINLN QAVRQTRTEA WYHIASAVAS SLTLAELLAQ
TRLAYLKPRI PVGDPRYGRI ERLGLRAQVL GGAAAFASAI YAAGRGYSRS SRGDEVASRT
WFVAGLAYLG AGGFWLAGSG GVGLSFLLVA VGASAIAGYV SDTSFADFCR NGPFTPTARE
RLGGSDRDSG WAWVARAVEV GPPVQRPAET GSWDDWPAVA AWWQRVLHRP PLRVAAEYSQ
QLGGRGALRQ VRLTLAGVAW RRDRLECRVL LCPEDGACQE VTPLPPAFIK AAPGEGSDAL
TVTLAWDALP TAPGWRGELC FLIRQRAVAG AGDDALPEPE ADGTPRYWVA RVPVPAWQGR
AKAAVAPRAL TVDEVLREEA AGSRSQG
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