Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0874 |
Symbol | |
ID | 4710421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 946900 |
End bp | 947664 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639855338 |
Product | pantothenate kinase |
Protein accession | YP_001002452 |
Protein GI | 121997665 |
COG category | [K] Transcription |
COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.349873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGCTCC TGCTCGATCT CGGCAACAGC GCGATCAAGT GGGCTGTTGT CCCGCCGGGG GGCGCGGCCT GGCAGACCGG CCGCCTGGCC TACGCCGACG GCGCCGGACC CGAGGACACG GCAGCGGCTC TGGGCGGGCG GATCCCAAGC ACCGTGGCGC CGGCGCGCAT CTGCGTGGCG AGCGTCCTCG CCCCGGCCTG GCAGCGGCGC TTCGATACGG CGCTGGAGCG CGCCTGGGGG GGGCCGGTTC AACACCTGGT CGCCAGCGCC GCGGCGGCTG GGGTCACCAA CGGCTACGAC CAGCCCGAGC AGCTCGGTGT TGACCGATGG GCCGCGCTCA TCGGTGCCCG AGCTGTAGCG CCGGAGGGCG CCTGCATCGT TGATGTTGGC ACGGCCATCA CCGTCGACGG ACTGGACGCC GACGGCCGGC ACCTCGGCGG TGCCATCTTT CCCGGCGCGC GCCTGCTGCA CCAGGCCTTG GCACGCGGCA CCGCGCGACT CCCCGACAGC CCAATCGGCG CCGCCGCCCT GCCGGCGCGC TCCACCGAGG AAGGCATCGC CGCAGGCGTC GCCGTCGGCG CCGGAGCAGC GGTGACCGCC CTGGCCGATG CGATCCTCGC CGCCTGCCCC CCGGGCGCGC AGCGCCTGAT CACGGGGGGC GGTGGCGGCG AGCTAGCCGC GGGGCTGAGC CCGGCCTGGT GCCACCGTCC CTACTTGGTC CTGGAAGGAC TGCTGCACTG GAGTCGACAC GAGGCCCGGC GTTGA
|
Protein sequence | MRLLLDLGNS AIKWAVVPPG GAAWQTGRLA YADGAGPEDT AAALGGRIPS TVAPARICVA SVLAPAWQRR FDTALERAWG GPVQHLVASA AAAGVTNGYD QPEQLGVDRW AALIGARAVA PEGACIVDVG TAITVDGLDA DGRHLGGAIF PGARLLHQAL ARGTARLPDS PIGAAALPAR STEEGIAAGV AVGAGAAVTA LADAILAACP PGAQRLITGG GGGELAAGLS PAWCHRPYLV LEGLLHWSRH EARR
|
| |