| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0829 |
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| Symbol | |
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| ID | 4711072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 910971 |
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| End bp | 912140 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639855288 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001002407 |
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| Protein GI | 121997620 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.490477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA ACCAGGAGTC CTGGCAGGTC GCCGTGATGC CCGGCGATGG CATCGGCCCG
GAGGTCATGG CCGCCACCCG CCACGCCCTG GAGGCCCTCC CCGGGCCCGC CCTGGTGCTG
ACCGAGCTGG GCTGGCCCGC CCACGCCTGG CACCGCGACC ACGGCGAGAT GATGCCCGCC
GACTGGCGCG GGCAGCTCGC CGGCTACGAC GCACTGCTCC TCGGCGCCCT GGGTGACCCC
GGGCCCAGCC ACGACGCCCA GCGCTACTGC CTTCCCGACG GCGTCTCGCT GGCGCCGCTG
CTGCAGCTGC GCAAGGGGCT CGACCTGTGG GCCTGCGAGC GCCCGGCGGT GCCCTTGGCC
GGCGCCCCCA TGCCCCTGTC GGACCCGCGG GCGCTGCACA CCGACCTGCT CGTCATCCGC
GAGAACAGCG AGGGCGAGTA CGTCGACCAG GGCGGCCGCC TGGCCGCCGG CACCCCGCGC
GAGACCGCCA CCCAGCTGGA GGTCTTCACC CGCGCCGGTA CCGAGCGGAT CATCCGCCAC
GCCTTCGAGC GCGCCGCGCG GCGGGCCGAG GAGCGCCGCC AGGGGCTGCG CGCCCCGCGC
TACGCCGCCG CAGACGGCGC TGCCGACGCC GCGGTGTGCG TGGTCACCAA GCGCAACGCC
GTGCAGTACG CCGGTGAGCT GTGGAGCGAG GTGTTCGCCG AGGTGGCCGC CGAGTACCCC
GGCATCGCCA CCCACCACGA GCTCATCGAC GCGTGCTGCA TGAAGTTCGT CAGCCAGCCG
TGGCAGTTCG ACGTGGTGGT GGCCAGCAAC CTCCACGGCG ACATTCTCAC TGATTTGGCC
GCGGTGCTCG CCGGCGGCAT GGGCGTCGCC CCCTCGGCCA ACCTCAACCC CGCCGACCGC
AGCGTACCGC CGCTGTTCGA ACCCACCCAC GGCAGCGCCC CGGATATCGC CGGCGCCGAT
CGCGCCCACC CAGCAGCCAT GCTGCTCACC GCCGCCGCCA TGCTCGAGTG GATGGGCGAG
GTGGACCCGG TGGCCGCCCG CTCGGCGGTG CAGCTCCAGC GCGCCGTGGC CGAGGACATC
GCCGAGCACG GTATGGGCGG GCGCGGCTGC GCCGAGGTCG GCCGCGCCGT GGCGCAACGC
ATCCGGACGG CCGGCGCGCC GTCCGCGTAG
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| Protein sequence | MEQNQESWQV AVMPGDGIGP EVMAATRHAL EALPGPALVL TELGWPAHAW HRDHGEMMPA
DWRGQLAGYD ALLLGALGDP GPSHDAQRYC LPDGVSLAPL LQLRKGLDLW ACERPAVPLA
GAPMPLSDPR ALHTDLLVIR ENSEGEYVDQ GGRLAAGTPR ETATQLEVFT RAGTERIIRH
AFERAARRAE ERRQGLRAPR YAAADGAADA AVCVVTKRNA VQYAGELWSE VFAEVAAEYP
GIATHHELID ACCMKFVSQP WQFDVVVASN LHGDILTDLA AVLAGGMGVA PSANLNPADR
SVPPLFEPTH GSAPDIAGAD RAHPAAMLLT AAAMLEWMGE VDPVAARSAV QLQRAVAEDI
AEHGMGGRGC AEVGRAVAQR IRTAGAPSA
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