| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0784 |
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| Symbol | |
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| ID | 4709364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 870642 |
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| End bp | 872330 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855244 |
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| Product | transposase, IS4 family protein |
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| Protein accession | YP_001002363 |
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| Protein GI | 121997576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5421] Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGTAC GCGTCGTCCG ATCCGGTCCC CGCCGCTACG TCCGCCTCGT CGAGGGCTAC
CGCGACGACA ACGGACGGGT GAAGCAACGC ACCGTCGCGA ACCTCGGGCG GGCCGACCAA
CTCAGCGATG ACGAGGTGGA CGGCCTCATC GAGGGCCTGC AACGCGCTGT TGGGCGGTCT
GAGCCCCGGA GAGCGGAACC GGAGTTTCAG CGTGCTCGCG CCTTCGGAGA CCTTTGGACG
CTCCATCAGC TCTGGCAGGA ACTCGGCCTG GATGACGCCC TTCGCAAGGC GCTGCGCTCG
TCGCGGCGCG AGTTCGACGC GGAGGCGCTG ATCCGCGCCA TGGTCTTCAA CCGGCTGGCT
GCACCGCGGA GCAAGCGCGG CGTGCTCGAC TGGCTTCAGG AGGATGTCAG CCTCCCGGGT
GTGGATTCTG AGCAACTGCA CCACGAGCAG CTGCTGCGCG CCATGGACGC GCTGATGAAC
CACCCCGAGC GGGTCGAGCA GGCCATTGCC GGGCAGCTCA AGCCCCTGCT CGATCAGGAG
CTCAGCGTCG TGTTCTGGGA CATCACCACG GTGCGCATCC ACGGTGTGGA GGAGGTCGCG
GACGATCTGC GCCAGCGCGG CAAGAGCAAG GACACAGGCG GCGTTGCCCG CCAATTCGCC
CTCGGGGTCG TGCAGACCTC CGATGGCCTG CCGATCGCCC ACGAGGTCTT CGAGGGCAAT
GTCGCGGAGA CGCGCACCCT GGCACCCATG CTCCAGCGCC TGCTCAGCCG CTACCCGATC
AGGCGTGTGG CCGTGGTCGC GGATCGGGGG CTGCTCAGCC TCGACAATGT CGACACGCTG
GAGGCGCTCA GCGCGCAGCA CGACCTGGCT ATCGATTACA TCCTGGCGGT GCCCGGACGC
CGGTATGCGG AGTTCACCGG CTTGATGAGC GAGCTGCAGC CGCAGCTCGA GAAGCAGGCG
GCAGAGCATG AGGGCGAAGC CGTCACCGAG ACCACTTGGC AGGGGCGCCG GCTGATTGTG
GCGCACAACC CGCAACGGGC TGCCGAACAG CAGGCCTCGC GCCGGCACAA GATCCACCGG
CTAGAGCAGA TCGGCGAGGC CCTGGCCCAG CGACTCGACA ACCAGGATGC GGGAAAGCCC
GGCCGCGGGC GGCGCTCGAC TGATCGCAGC GCCCATCGGC GCTTCCATCA GCACGTCCTG
CGCAGCAGCC TCTCGAGCAT CGTCAAGGCC GACCTCGGCG CCGAGCAATT CCGCTATGAC
ATCGACGAAG AGGCGTGGGC GGCCGCCGAG CGGCTCGACG GCAAGCTGCT GCTGGTCACG
AGCCTCCACG AGTACTCGCC GAGCGAGATC GCCGACCGCT ATCGGGCCCT TGCGGACATT
GAGCGCGGCT TCCGCGTGCT CAAGAGCGAC ATCCAAATCG CGCCGGTCTA CCACCGGCTG
CCGGAGCGCG TCCGTGCCCA CGCGCTCATC TGCTTCCTGG CCCTGGTTCT GCATCGCATC
CTGCGCCGGC GTCTCAAGGC GGCTGGTAGC GGTTACTCAC CGGAGAACGC GTTACGGGCG
CTGCGCCGTA TACAGCGCCA CAAAGTTCAC CTCGCCGGGC AGGACTACGA GCGGGTGACC
AAGCCGACAC CGGAGCAACT CCAGCTCTTC GACGAGCTAG GTGTAGAGGT GCCTCAGCAC
CCGGCTTGA
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| Protein sequence | MYVRVVRSGP RRYVRLVEGY RDDNGRVKQR TVANLGRADQ LSDDEVDGLI EGLQRAVGRS
EPRRAEPEFQ RARAFGDLWT LHQLWQELGL DDALRKALRS SRREFDAEAL IRAMVFNRLA
APRSKRGVLD WLQEDVSLPG VDSEQLHHEQ LLRAMDALMN HPERVEQAIA GQLKPLLDQE
LSVVFWDITT VRIHGVEEVA DDLRQRGKSK DTGGVARQFA LGVVQTSDGL PIAHEVFEGN
VAETRTLAPM LQRLLSRYPI RRVAVVADRG LLSLDNVDTL EALSAQHDLA IDYILAVPGR
RYAEFTGLMS ELQPQLEKQA AEHEGEAVTE TTWQGRRLIV AHNPQRAAEQ QASRRHKIHR
LEQIGEALAQ RLDNQDAGKP GRGRRSTDRS AHRRFHQHVL RSSLSSIVKA DLGAEQFRYD
IDEEAWAAAE RLDGKLLLVT SLHEYSPSEI ADRYRALADI ERGFRVLKSD IQIAPVYHRL
PERVRAHALI CFLALVLHRI LRRRLKAAGS GYSPENALRA LRRIQRHKVH LAGQDYERVT
KPTPEQLQLF DELGVEVPQH PA
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