| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0577 |
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| Symbol | |
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| ID | 4710396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 654833 |
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| End bp | 655684 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639855035 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001002165 |
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| Protein GI | 121997378 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.576653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCAA GCCACATCCC TCCCGAGACC CTGGCCCGCG CGGCGCCGCC AGGCTCGAGC
CTGGACTACG CCCTGCGCCT GGCACCGGCG CACCAGCGCG AACCGCTGCA GGCCATCGCG
GCGTTCACGG GCGAGATCCG GCGCATCCCG TGGCATACCC AGGAGGCCGA AGTCGGCCGC
GCCACGCTGC ACTGGTGGCG CACCGAGCTG GCCCGGATCC TCGAGGGCGG CGGGCAGCAC
CCGCTGGCGG CGCCGCTGGC CGCTGCAGTG CATGAGCACC AACTCCCGGG CGCGGAGCTG
CGCGCGATCC TCGATGAGGC GGACCGTGCG CTGGACGGCG ACCGGCCGGA GACTTTTCCC
GAGCAGCTCC GTCTGGCCGA GCGCCACGCT GCGGCCCCGC TGCGTCTGGC AGCGCAGGTG
CTGGTCGGCG ACGCTAGCGC CACTGGGTAC GCCACGGCCC TGGGCAGCGC TGTCGGGCTC
ACCCGCAGTC TGCGCCTGCA GGGGCTGGCT GCGCGCTACG GCGACAGTGA TCTGCCCCGG
GAGACGCTGC GCCAGGCCGG GGTGCCGGCG GAGGGGCCGT TGCTCCAGTC CGATGGCACG
GCCCTGCCCT CGTTGCTTCG GGCGCTGGCC GTGCAGGCCG ATGCCATCGC GCCGTTGTTT
CCGGCGGCGC GCGGGCAGGC GCCGGAGGAC CGTCGGCGGG TGGCTGCCTT GCGCCCGGTG
ACGGCGTACG CTGCGCTGCA CCAGGCGCTG ATCGCGGAGA TCCTGCGCCG CGGGCCGGCG
GAGCTGATCC GTGGCCGGCT GACGCTCACG CCGTTGCGCA AGGTGTGGGT CGCTTGGCGG
GGGCAGCCGT AG
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| Protein sequence | MSPSHIPPET LARAAPPGSS LDYALRLAPA HQREPLQAIA AFTGEIRRIP WHTQEAEVGR
ATLHWWRTEL ARILEGGGQH PLAAPLAAAV HEHQLPGAEL RAILDEADRA LDGDRPETFP
EQLRLAERHA AAPLRLAAQV LVGDASATGY ATALGSAVGL TRSLRLQGLA ARYGDSDLPR
ETLRQAGVPA EGPLLQSDGT ALPSLLRALA VQADAIAPLF PAARGQAPED RRRVAALRPV
TAYAALHQAL IAEILRRGPA ELIRGRLTLT PLRKVWVAWR GQP
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