Gene Hhal_0533 details

Gene Information

• Locus tag: Hhal_0533
• ID: 4709185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 601322
• End bp: 601906
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639854990
• Product: TPR repeat-containing protein
• Protein accession: YP_001002121
• Protein GI: 121997334

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGAT GGCGGATGTT CTCCGCGCTC CCGGCCCTGG TATTGCTGGC GCCGGTGGCT 
TGTTATGTGC CGCCTGATGA CGGGATCGCC CGGAGCGATC ATGATACGGC CGAGCAGGCC 
GATGCGTCTC GGGGGGATGC CCCGGAGCGA GAGACGGAGC AAGAGCAGGA GGATCAGGGC 
GGCTGGTGGT CGCAGCCGCA GCCCGCGCCT CGGCAGGAGG AGGACCAGAC CCGGGGCGAC 
GACGTGGCGA CGCTGGCCCA GCGGGCCCGG GAGGCGTACG AGGGGCGCGA CTACGACGGC 
GCCGTGCGGC ATCTGGAACA GGCCCTGGAC CAGGCCCCGG AACAGGGGGT GCTTTGGCAG 
AACCTGGCTG CGGTGCGGTA TCAGCAGGGT CACTACCAGC GAGCGGAGGA GCTGGCCCTG 
CGCGCTGTGG ATACCGGCGA TCAGGACCTC GCCGTGATGC GTGAGGCGTG GTGGCTGGTG 
GCGGCGGCGC GCATGGAGCG GGGGGATCGT GGCGGGGCGC GGGATGCGGC GTCCACGGCG 
CGACGCTTCG GCGAGGCCGG AGACGGCGGC CTTGGTGGAT TCTAG 

 

Protein sequence

MTRWRMFSAL PALVLLAPVA CYVPPDDGIA RSDHDTAEQA DASRGDAPER ETEQEQEDQG 
GWWSQPQPAP RQEEDQTRGD DVATLAQRAR EAYEGRDYDG AVRHLEQALD QAPEQGVLWQ 
NLAAVRYQQG HYQRAEELAL RAVDTGDQDL AVMREAWWLV AAARMERGDR GGARDAASTA 
RRFGEAGDGG LGGF