| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0474 |
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| Symbol | |
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| ID | 4711473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 542169 |
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| End bp | 544388 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639854933 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_001002064 |
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| Protein GI | 121997277 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCG ACCTCGACGA CGACATCGTG CAGGACTTCC TGGTCGAGTC TCGGGAGATC
CTCGACCGGC TGGGCGAGCA GCTGGTGGAC CTGGAGCAGC ACGGCGAGGA TAAGGACCTG
CTCAACTCGG TCTTCCGCGG CTTCCACACC ATCAAGGGCG GCGCCGGGTT CCTGGGGCTC
GACCCGCTGG TGGACGTCTG CCACCGCACC GAGGACGTCT TCAACCTGCT GCGTAATGGC
GACAAGCAGG TCTCCCAGGA ACTGATGGAC TCCGTCCTGC GCGCCCTCGA TGTGGTGGTG
GCGCAGTTCG GACAGATCGA GAGCGGCAGC GACCCGGAGC CCGCCCCGGC GGAGCTGCTC
CAGGAGCTCG ACCGCCTCAA GAAGCCGGAT GCCGGCGGCT CTGCGCCGCC GGCTGCCGGT
GCCGAGCCGG CGCCGGCCGC CGCACAGCCG GCAACGCCGG GGCAGGGCGG CGATGGGAGT
GACGCCGAGT TCGACGAGCT GCTGACAGCC CTCGATGAGG GGGATGAGGC CTCCGTCGAT
ACCGGCGGAG ACGAGATCTC CGACGCCGAG TTCGAGCAGC TCCTCGACGA ACTGCACGGC
AAGGGGCAGC ACCAGGGCAA GCCGGCGGCC GAGCAGCCGG CCGCCGACGC CCCCGCCGGG
TCGGACTCGG GTGGGGGCGG TGAGGAGATT ACCGAGGAGG AGTTCGAGCA GCTGCTCGAC
AGTCTCTACG GCCCCGGCGC CGCGCCGGGC AAGGATGCGC CGCCGCCGGC GGTGGACGGC
GCGCAGGAGA GTACCCCGGA GCCGGCCCCG CCCCAGCCGT CGCCGTCTAG TCCATCCGCC
CCCGAACAGC CGGCGGCCGA GTCGCCGCAG CCTGCCACGG GCCAGGGGAG CGGTGGTGCC
GAGAAGCCCG CCCGGCAACC CGCCGCCGGT GGCGGTGGCA ACAAGGGCGG CGGGGGTGGC
GGCGCCGCCG ATAAAGGTGG CGCCGCCGGT GCCGATGCCG GCGGTGGCGG CAACAAGGTC
GAGGCCTCGG TGCGGGTGGA TACCGCCAAG CTCGACGAGA TCATGAACCT GGTCGGCGAG
CTGGTGCTGG TGCGCAACCG CCTCTCCAAT CTGCGCAACG AGGTCGACGA CGACCGCCTC
GGCCAGGCGG TCAGCGATCT CGAGCTGGTC ACCTCCGACC TGCAGTCTTC GGTGATGAAG
ACGCGCATGC AGCCGATCAA GAAGGTCTTC GGGCGTTTCC CCCGAGTGAT CCGCGACCTG
GCGCGCCAGC TCGACAAGGA GGTCACCCTG GAGACCCACG GCGAGGACAC CGACCTGGAC
AAGAACATGG TCGAGGCCCT GGCCGATCCC ATGGTCCACC TGGTGCGCAA CGCCGTCGAC
CACGGCGTGG AGTACCCCGA TGAGCGCGAG GCCGCCGGCA AGCCGCGCCA GGGCACGGTG
ACCCTGGCCG CCGAGCAGGA GGGCGACCAC ATCCTGCTGA CCATCGCTGA CGACGGGCGC
GGCATGGACC CGGACAAGCT GCGCGGCCTG GCGGTGAAGA AGGGCCTGAT GGACGAGGAG
TCGGCCTCGC GGCTCGACGA CAAGGAGGCG TTCAGCCTCA TCTTCCACGC CGGTTTCTCC
AGCAAGGAGG AGATCTCCGA CGTCTCCGGA CGCGGCGTGG GCATGGACGT GGTCAAGAAC
AGCCTCTCGC GGCTCAACGG CACGGTGGAC ATCGACTCGG AACTGGGCCG CGGCACGGTC
ATGCGCATCC AGCTGCCCCT GACCCTGGCC ATCCTGCCGA CGCTGATGGT CAAGATCTCC
GGGCGCAAGT TCGCCCTGCC CATGTCGGTA GTCCGCGAGA TCTTCGAGCT CCAGGACGTG
CGTACCAACG TGGTCAACAA CCGCCTGGTG GCCATCGTCC GCGACAAGGC CATGCCACTG
TTCTTCCTCG AGCGCTGGCT CAGCCAGGCG GGCGAGCCGG TGTTGACCAC CAAACGCGAG
ATGGCCAACG GTGAGGAGTC CGAGGACGAG CGCCAGGTCA TCACGGTGAT CGTCGGCAAT
CAGGCGGTGG GCTTCGTCGT CGATGAGGTC ATCGGTCTCG AGGAGGTGGT CATCAAGCCC
CTCGGTGCGC TGCTCCACGG CCTGCCCGGG TTGGCTGGGT CCACGATTAC CGGCGACGGG
CAGATCGCCC TGATCGTCGA CATTCCGAGC CTGATCAAGG CGTACGGCAA GCGGCTGTAG
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| Protein sequence | MAIDLDDDIV QDFLVESREI LDRLGEQLVD LEQHGEDKDL LNSVFRGFHT IKGGAGFLGL
DPLVDVCHRT EDVFNLLRNG DKQVSQELMD SVLRALDVVV AQFGQIESGS DPEPAPAELL
QELDRLKKPD AGGSAPPAAG AEPAPAAAQP ATPGQGGDGS DAEFDELLTA LDEGDEASVD
TGGDEISDAE FEQLLDELHG KGQHQGKPAA EQPAADAPAG SDSGGGGEEI TEEEFEQLLD
SLYGPGAAPG KDAPPPAVDG AQESTPEPAP PQPSPSSPSA PEQPAAESPQ PATGQGSGGA
EKPARQPAAG GGGNKGGGGG GAADKGGAAG ADAGGGGNKV EASVRVDTAK LDEIMNLVGE
LVLVRNRLSN LRNEVDDDRL GQAVSDLELV TSDLQSSVMK TRMQPIKKVF GRFPRVIRDL
ARQLDKEVTL ETHGEDTDLD KNMVEALADP MVHLVRNAVD HGVEYPDERE AAGKPRQGTV
TLAAEQEGDH ILLTIADDGR GMDPDKLRGL AVKKGLMDEE SASRLDDKEA FSLIFHAGFS
SKEEISDVSG RGVGMDVVKN SLSRLNGTVD IDSELGRGTV MRIQLPLTLA ILPTLMVKIS
GRKFALPMSV VREIFELQDV RTNVVNNRLV AIVRDKAMPL FFLERWLSQA GEPVLTTKRE
MANGEESEDE RQVITVIVGN QAVGFVVDEV IGLEEVVIKP LGALLHGLPG LAGSTITGDG
QIALIVDIPS LIKAYGKRL
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