Gene Hhal_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0468 
Symbol 
ID4711547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp536535 
End bp537008 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content71% 
IMG OID639854927 
Productcupin 2 domain-containing protein 
Protein accessionYP_001002058 
Protein GI121997271 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG GCGAGCACGA GGCCTCCCGC GTCCTGCGTG AGCGGGATTA CCGCTGGGAA 
GGCACCGAGG AAGAGGCCTA CAAGGCGGAG GGCACCCACT TCAGCGGTGC CCGCCGCCAG
ACCCTGGTCG GCCGCCCGGC CGGGCAGGAG GCGCCGGCCT TCGAAACCCG CTACTTCGAA
GTGGAACCCG GGGGCTACAC CACCCTGGAG CGCCATGAGC ACACCCACGT GGTCATCGTG
GTCCGGGGCC ACGCCGAGGT GGTCCTGGAC GACCGGGTCG AGCCCCTGAC GCCGCTGGAC
TGTGTCTACA TCGCCCCCCA CGCCTGGCAC CAGATCCACG CCACCGGGGC CAACGAGCCG
CTGGGATTCC TGTGCATCGT CGACAGCGAC CGCGATCGGC CACAGCGCCC GGACGCCGAC
GATCTGGCGC GCCTCTGTGC CGACCCGGCC GTCGCCCGGC GCATCCGTAC CTGA
 
Protein sequence
MSSGEHEASR VLRERDYRWE GTEEEAYKAE GTHFSGARRQ TLVGRPAGQE APAFETRYFE 
VEPGGYTTLE RHEHTHVVIV VRGHAEVVLD DRVEPLTPLD CVYIAPHAWH QIHATGANEP
LGFLCIVDSD RDRPQRPDAD DLARLCADPA VARRIRT