Gene Hhal_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0369 
Symbol 
ID4711367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp434506 
End bp435102 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID639854832 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001001965 
Protein GI121997178 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.406027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACG ACGCCGCTGC ACAACCGAGC GCCGAGACGC GCTTGCGCCA CGAGGCCGAG 
CAACGCCTGG TCGACGGCAA CGCCCCCAGC GCTGGAGGCT GGACCATCAG CGCCGAGACC 
CTTTCGCTGC TCTACCGCTT GGCCAGCCAG CCCGAGCGAG CTGCCGATGC GCTGAAACTG 
CTGCACGAAC TGCAAACGCA CCAAGTGGAA CTCGACTTGC AGCAGGAGTA CAGCGAGGCG 
AACGAACAGG CACTCACCGA GGAGTTGCAC CACTACCGCA CACTGTTCGA ACACGCCCCG 
GTGGGCTATT TCGTGCTGGA TCTCGAGGGG CGTCTTCTCG ATACCAATCG GCTCGGCGCG 
GAATGGCTCA ACCTCGAGGC GAGCGCCGCA GCCGGTCAAC CACTGAGCTG GTTCCTGGAT 
CCGGGCTGCC GCCAGGCGTT CACTGCACTC CTGGAGACCC TGCGCCAAGG GGGATCGGGC 
GCAACCTGCC ATGTCTGTAC CCCCAATGGC GCAGACGCAC CGCAGCGCTG GCGGATCGAC 
GCCGCTCTCG GGCCAGGAGT GGACAACATC CTCGTGGTCG CATCCGCGAC CGAGTGA
 
Protein sequence
MKYDAAAQPS AETRLRHEAE QRLVDGNAPS AGGWTISAET LSLLYRLASQ PERAADALKL 
LHELQTHQVE LDLQQEYSEA NEQALTEELH HYRTLFEHAP VGYFVLDLEG RLLDTNRLGA 
EWLNLEASAA AGQPLSWFLD PGCRQAFTAL LETLRQGGSG ATCHVCTPNG ADAPQRWRID 
AALGPGVDNI LVVASATE