Gene Hhal_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0362 
Symbol 
ID4711206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp421990 
End bp423546 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content71% 
IMG OID639854825 
Productmethyltransferase type 12 
Protein accessionYP_001001958 
Protein GI121997171 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.72532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTGGA GCGGTGGCTA CGTCTCGGAC ATCAACTACA TCAGCGGCTT CTATCGGGAG 
ATCGCCCCGG GGTACCTGAG TTTCGTGGCC CGCCTGCGGG GCGAGCCGGC GCCGGATCCG
GCCCGGCCGT TTCGCTACGC CGAGCTCGGC TGCGGCCAGG GGCTGGGGAC CAACCTGCTC
GCCGCCGCCA ATCCCCACGC CGAGTTCGTC GGCATCGACT TCCTCCCCGG GCAGATCGCC
AATGCCCGGG ACCAGGCCGC AGCAGCCGGG TTGGGCAATG TCACCTTCCA CGAGGCGAGC
TTTGCCGAGG CCGCCGACTG GCCCGCTGCG GCGCTGGAAC CCTTCGACTA CATCACCTTG
CACGGCATCT ACGCTTGGGT CAGCCCGGCC AATCGGCAGG CCATTGTGCG CTTCATCGAG
CGCTGGCTGA AGCCCGGAGG GCTGGTCTAC GTCAGCTACA ACGCCATGCC GGGGTGGGCC
GGCGTGCTGC CCTTCCAGCG CCTGCTGCGC GAGCACGCCG CCCGCCACCC CGGCCGCAGC
GACGAGCAGG TCCAGTCCGG GCTGGCCTTT CTGCAGCGGC TGCGTGAGGC GGGGCTGGCC
TACTTCGACC GCCACCCGGC GGCCCCGGCC AAGCTTGACG GCCTCGGTGA TATCGCCCGG
GAGGCCACCT ACCTGGCCCA CGAGTACCTC AACAGCGCCG CGCAGCCGTT GTACTTCACC
GACGTGGTCG CCGATCTGGC CCCGGCCAAG CTCGACTACG TCGGCTCAGC CGATCTGGTG
GAGAACTACG ACGTCCTGAG CCTCCCCGAG GCGGCCCGCG CGGCCTTGGA GGAGGTCGCC
GACCCCCACT ACCGCGAATT GTTGCGCGAC TACGCGGTCA ACCGGGTGTT CCGCCGTGAC
ATCTTCATCA AGGGCAGTCG CCGCGGGACC ACGGCACAGC AGGACGCGGC GCTGCTCGAG
ACGTCCCTGG CGCCGCTGCT CACCCGCTCC GAAATGACGC CGGTGTTCCA CACCAACCTC
GGCGAGCTGA CCGGGCAGGC CCGGATCTAT GAACCGTTGA TGGACCGCCT CGCCCGCGGT
ACGACCACGC TGGGCGCCTT GCGCGAGGCC ACCGGGATCG AATTGGCGGC CCTGATCCAG
GCCTGCACCG TCCTCGTGGC CACCGGCCAG GCCCATCCGG CCCAGCCAGT CGCCGATGCG
GGGCCCGCCC GGCGGCTGGC CAAGCTGCTG GCCGCCCGCA TCCTCGACGA TGAACCCCAC
GGCCATCTGC CCGCCCCGGC GATCGGCAGT GGCGTCGCCG CATCGGATAC CGAGATCGTC
GCCCTGAGTG CGCTGCTTGA CGGGGTCCCG CCCCGCGCCC GGCGGCTGGC CGAGGCCGTC
TGGGCGCGTT TCCGGCCCGT GGGGCGGCGC ATGCTGCGGG ACGGCGAGGT CCTCGAGTCC
GAGCGGGAGA ACCTGCGCGA GCTGCAACAG CGCGCTGGGG CCATCCTGCG CGAGCGACTG
CCGGTCTGGC AGGGCCTGGG GTTGCTCGAC GCCGGCGACG ATCGGCGCAG CGGCTGA
 
Protein sequence
MDWSGGYVSD INYISGFYRE IAPGYLSFVA RLRGEPAPDP ARPFRYAELG CGQGLGTNLL 
AAANPHAEFV GIDFLPGQIA NARDQAAAAG LGNVTFHEAS FAEAADWPAA ALEPFDYITL
HGIYAWVSPA NRQAIVRFIE RWLKPGGLVY VSYNAMPGWA GVLPFQRLLR EHAARHPGRS
DEQVQSGLAF LQRLREAGLA YFDRHPAAPA KLDGLGDIAR EATYLAHEYL NSAAQPLYFT
DVVADLAPAK LDYVGSADLV ENYDVLSLPE AARAALEEVA DPHYRELLRD YAVNRVFRRD
IFIKGSRRGT TAQQDAALLE TSLAPLLTRS EMTPVFHTNL GELTGQARIY EPLMDRLARG
TTTLGALREA TGIELAALIQ ACTVLVATGQ AHPAQPVADA GPARRLAKLL AARILDDEPH
GHLPAPAIGS GVAASDTEIV ALSALLDGVP PRARRLAEAV WARFRPVGRR MLRDGEVLES
ERENLRELQQ RAGAILRERL PVWQGLGLLD AGDDRRSG