Gene Hhal_0331 details

Gene Information

• Locus tag: Hhal_0331
• ID: 4711277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 374309
• End bp: 374968
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639854791
• Product: MSHA biogenesis protein MshJ
• Protein accession: YP_001001927
• Protein GI: 121997140

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATCC GCCGCAGCCT GCAGCAACTC AACGACGCCC TCAACGCCCG CACGCCGCGC 
GAGCGCGTGC TGATGGTGAT CGCCGGCCTC GGGGTCATCG GCGCGGGGTG GTACTATCTG 
CTCTTCGAGC CCATGCAGCA GCGCAGCGCC GATGCGCAGC AGCGCATCGA GTCCGCCGAG 
CAGCAGATCC GCGACCTCCG CACCCAGCGC GAGAGCCTGG AGGCCGAGCT GGGCGACGAT 
CCGGAGGCCG ATGTCCGTGC CGAGCTCGAT GCCCTGCGCG ATGAACTCCT GGCACTGGAA 
CGGGACGTCG GCGAGCGGGT GCCGGAGTTC ATCGAGCCCG AACGCATGCG CCAGGTGCTG 
CGGGCGGTGC TCGCCGAGCA CCAGGGGGCG CGGCTGGTCC GCCTCGAGCG CCTGCCGGCG 
CAGGAAGTGG CCGGCGTGGA GGATGGCGAC GACGATGCCC CGCAGATCTT CCGCCACTCC 
GTCCACCTCG AATTCGAGGC GGACTACGCC ACGACCGTCG CCTACCTGCA GGCCGTCGAG 
GCCCTGGAGT GGCAATTTGC CTGGGAGAGC CTGGACTATG AGGTCACCGA TCACCCGCGG 
GCCCGCGTGC GCGTCCGACT GCACACCCTC AGCGGCCACC GTGCGTGGTT GGGGGTCTAG 

 

Protein sequence

MDIRRSLQQL NDALNARTPR ERVLMVIAGL GVIGAGWYYL LFEPMQQRSA DAQQRIESAE 
QQIRDLRTQR ESLEAELGDD PEADVRAELD ALRDELLALE RDVGERVPEF IEPERMRQVL 
RAVLAEHQGA RLVRLERLPA QEVAGVEDGD DDAPQIFRHS VHLEFEADYA TTVAYLQAVE 
ALEWQFAWES LDYEVTDHPR ARVRVRLHTL SGHRAWLGV