Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0240 |
Symbol | |
ID | 4711094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 276220 |
End bp | 277155 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639854700 |
Product | ABC transporter related |
Protein accession | YP_001001836 |
Protein GI | 121997049 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0491819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAACG AATCCGACCG CGCCGATGGC CCGGCGGTCC GGGCCGTCGG CCTGCTCAAG CGCTACGGCG GGACTACGGT GGTCGACGGC ATCGATCTGC ACGTCCCCCG GGGCGAATGC TTCGGGCTGC TCGGGCCCAA CGGCGCCGGC AAGACCACCA CGCTGCGCAT GATCCTCGGG GTTACGCCGC CGGACGGCGG CACCCTGGAG GTCCTCGGCG AGCCGGTACC GGCCCGCGCC CGAGCGATGC GCGCGCGCAT GGGGGTGGTG CCGCAGATCG ACAACCTGGA TCCGGACTTC ACCGTCCGCG AGAACCTCTT CACCTACGCC AGCTACCACG GCCTCAGCCG CGAGGCGGGG CGGCCGCGGG TGGAGGAGCT GCTGGCGTTC GCCGCGCTGG AGGGCAAGGC CGAGGCGCCC ATCGCCTCGC TCAGCGGCGG CATGAAGCGC CGCCTGACCC TGGCCCGGGC GCTGGTCAAC GATCCGGATC TGGTGGTCCT CGACGAACCC TCCACCGGGC TCGACCCCCA GGCGCGGCAG AACATCTGGC AGAAGCTGCG GGCGCTGCAG AAGCAGGGGC GCACCCTGGT GATCACCACC CACTACATGG AGGAGGCCGA GCGCCTCTGC GACCGGCTGG CGATCATGGA CCACGGCCGG ATCATCGACT GCGACAGCCC GGCGGCGCTG GCGCGCAGCC ATCTGGAGCG CTACGTGGTG GAGCTGCGCG GCGACGAGGC GCGGACCTGG CTCGGCCAGT CCGGGCTCTC CGGGGCGGCG CGGGTGCGCG AGGTGGGCGA GACGGTACTG CTCTACGCCG ACGACCCGGC GCCGGTGGCC AGCGCCCTGC AGGCCCAGGG GCTGACCTAC CTGCAGCGTC CGACCAACCT CGAGGACGTC TTCCTCCACC TCACCGGCCA CGAACTGCGG GAGTGA
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Protein sequence | MVNESDRADG PAVRAVGLLK RYGGTTVVDG IDLHVPRGEC FGLLGPNGAG KTTTLRMILG VTPPDGGTLE VLGEPVPARA RAMRARMGVV PQIDNLDPDF TVRENLFTYA SYHGLSREAG RPRVEELLAF AALEGKAEAP IASLSGGMKR RLTLARALVN DPDLVVLDEP STGLDPQARQ NIWQKLRALQ KQGRTLVITT HYMEEAERLC DRLAIMDHGR IIDCDSPAAL ARSHLERYVV ELRGDEARTW LGQSGLSGAA RVREVGETVL LYADDPAPVA SALQAQGLTY LQRPTNLEDV FLHLTGHELR E
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