Gene Hhal_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0240 
Symbol 
ID4711094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp276220 
End bp277155 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content72% 
IMG OID639854700 
ProductABC transporter related 
Protein accessionYP_001001836 
Protein GI121997049 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01288] ATP-binding ABC transporter family nodulation protein NodI 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0491819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACG AATCCGACCG CGCCGATGGC CCGGCGGTCC GGGCCGTCGG CCTGCTCAAG 
CGCTACGGCG GGACTACGGT GGTCGACGGC ATCGATCTGC ACGTCCCCCG GGGCGAATGC
TTCGGGCTGC TCGGGCCCAA CGGCGCCGGC AAGACCACCA CGCTGCGCAT GATCCTCGGG
GTTACGCCGC CGGACGGCGG CACCCTGGAG GTCCTCGGCG AGCCGGTACC GGCCCGCGCC
CGAGCGATGC GCGCGCGCAT GGGGGTGGTG CCGCAGATCG ACAACCTGGA TCCGGACTTC
ACCGTCCGCG AGAACCTCTT CACCTACGCC AGCTACCACG GCCTCAGCCG CGAGGCGGGG
CGGCCGCGGG TGGAGGAGCT GCTGGCGTTC GCCGCGCTGG AGGGCAAGGC CGAGGCGCCC
ATCGCCTCGC TCAGCGGCGG CATGAAGCGC CGCCTGACCC TGGCCCGGGC GCTGGTCAAC
GATCCGGATC TGGTGGTCCT CGACGAACCC TCCACCGGGC TCGACCCCCA GGCGCGGCAG
AACATCTGGC AGAAGCTGCG GGCGCTGCAG AAGCAGGGGC GCACCCTGGT GATCACCACC
CACTACATGG AGGAGGCCGA GCGCCTCTGC GACCGGCTGG CGATCATGGA CCACGGCCGG
ATCATCGACT GCGACAGCCC GGCGGCGCTG GCGCGCAGCC ATCTGGAGCG CTACGTGGTG
GAGCTGCGCG GCGACGAGGC GCGGACCTGG CTCGGCCAGT CCGGGCTCTC CGGGGCGGCG
CGGGTGCGCG AGGTGGGCGA GACGGTACTG CTCTACGCCG ACGACCCGGC GCCGGTGGCC
AGCGCCCTGC AGGCCCAGGG GCTGACCTAC CTGCAGCGTC CGACCAACCT CGAGGACGTC
TTCCTCCACC TCACCGGCCA CGAACTGCGG GAGTGA
 
Protein sequence
MVNESDRADG PAVRAVGLLK RYGGTTVVDG IDLHVPRGEC FGLLGPNGAG KTTTLRMILG 
VTPPDGGTLE VLGEPVPARA RAMRARMGVV PQIDNLDPDF TVRENLFTYA SYHGLSREAG
RPRVEELLAF AALEGKAEAP IASLSGGMKR RLTLARALVN DPDLVVLDEP STGLDPQARQ
NIWQKLRALQ KQGRTLVITT HYMEEAERLC DRLAIMDHGR IIDCDSPAAL ARSHLERYVV
ELRGDEARTW LGQSGLSGAA RVREVGETVL LYADDPAPVA SALQAQGLTY LQRPTNLEDV
FLHLTGHELR E