Gene Hhal_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0208 
Symbol 
ID4710978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp240199 
End bp241893 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content64% 
IMG OID639854667 
Productcellulose synthase (UDP-forming) 
Protein accessionYP_001001804 
Protein GI121997017 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0946427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAAC GCCGCTTCCT GAACCGCAGC CTGCTGATCA TCCTCACCGG CGCCGCCATC 
CTCAGCGTCT TCACCTACCT GATCGGTCGG ACGGCGCTGT TCCTGTTCGC CGACTACCTG
TGGTACGAGA AGACCGCGGC CGCATTCCTG CTACTCGCCG AGGCGTTCAT CATGGTCCAC
GCCCTCGGCT ACTTCCTGAA CATCTACCAC GCCAATCGCA CCCGGCCCGT GGACCCCGCA
GCGCCCACCG CCGAACGCGA GATCCCCTCC GCCACGGCAC CGCGCTTTTC CTACGAGCAG
GCCCTGAAGA TCCTCCCGAC GGAAAACCCG CCAGAACTCG CGGTGGTCGT GGCCGCACAC
AACGAGCCCC TGTGGCTGAT TGAAGAGACC CTGACCTGCT TCTACAACCT GACCTACCCC
AACAAGCGGA TCTTCCTGCT CGACGATACC CGCTACGACC CATCGGAACA GCGCTCCGCG
GAGATGGCCA AGTACCGCCA GGCGATCGAG GACCTGTGCC AGGGCATCGG CGTCCACCTC
TTCCGGCGCC CCTGGCGCGG GGCCAAGGCC GGCATGATCA ATGACTTCCT GGCCTTCCTC
AACGACCGCG CGCCAGCCGG CTTCGAGTTC ACCCGCAGTC CGCTGGATGT CGAGCCCTTC
AATATCGAAT ACGTGGCCGT CTTCGACGCC GATATGAACC CGTTGCCCGA ATTCGCCGAA
CCGCTGATCG CCCAGCTCGA GAGCGAACCG AACCTGGCCT TCATCCAGAC ACCGCAGTAC
TACTCCAACT TCGAGACCAA CCGGGTCGCG CGGGCCGCCG GCATGCAGCA GGCGATCTTC
TACGAGTACA TCTGCGAGGG GAAAAGCTCC CAGGACGCCA TGTTCTGCTG CGGTACCAAT
GTCATCTTCC GCCGCGCAGC GCTGGAAGAC GTCGGCGGCT TCGACGAGAC CTCGGTCACC
GAGGATTTTG CCACCTCGCT GCGCTTTCAC GCACGCGGGT GGCGCTCCGC CTACATCAAC
CGGCTCAGTG CGTTCGGGCA GGGTCCGCAG GACCTGGGCG CCTACTTCAA GCAGCAATTC
CGCTGGGCGC TGGGCACCGT GGGGCTGTTC CGCACGGTCC TCCAGGCCAT GGTGCGCACG
CCGCGCCAGC TTTCGCTGGC CAAGTGGTGG GAGTACTCCC TTTCCGGCAC CCACTACTTC
GTCGGCTGGG TGTTCCTGAT CATGGTGCTC AGCCCGACCC TCTACCTCCT GCTGGGCGTG
CCGAGCTTCT TCGCCCGGGC GGATATCTAC CTGCTGTTCT TCTTCCCCTA CATCCTGCTG
ACGATCACCC TGTTCGCCTT CGCTATGAGT CAGCGCAAGT ATCGGCTGCG CGAGCTGGTC
ACCGGGATCG TCCTTCAGGC CACGGCCTTC CCCGTCTATA TCAAGGCCAG CCTGCTGGGC
ATTCTGGGGG TCCGGGGAAG CTTCACGGTC ACCCCGAAGG CCGGTAGCAA CGGGCTCCCC
CTGCGCGCCC TGTGGCCCCA CCTGGCACTG ATCGTGCTGT GCACCGCGGC GATCACCTGG
GGCGTACTGC GTGGCGTCTT TGAGCAGGAG CCGCTCTGGG CGCTGGTGGT CAACACCCTC
TGGTGCAGCT ACCACCTCAC GCTGCTGCTG GCTGTCTTCT ACTTTAATCA TCAACCGCAG
GAGCAGACGG CATGA
 
Protein sequence
MGQRRFLNRS LLIILTGAAI LSVFTYLIGR TALFLFADYL WYEKTAAAFL LLAEAFIMVH 
ALGYFLNIYH ANRTRPVDPA APTAEREIPS ATAPRFSYEQ ALKILPTENP PELAVVVAAH
NEPLWLIEET LTCFYNLTYP NKRIFLLDDT RYDPSEQRSA EMAKYRQAIE DLCQGIGVHL
FRRPWRGAKA GMINDFLAFL NDRAPAGFEF TRSPLDVEPF NIEYVAVFDA DMNPLPEFAE
PLIAQLESEP NLAFIQTPQY YSNFETNRVA RAAGMQQAIF YEYICEGKSS QDAMFCCGTN
VIFRRAALED VGGFDETSVT EDFATSLRFH ARGWRSAYIN RLSAFGQGPQ DLGAYFKQQF
RWALGTVGLF RTVLQAMVRT PRQLSLAKWW EYSLSGTHYF VGWVFLIMVL SPTLYLLLGV
PSFFARADIY LLFFFPYILL TITLFAFAMS QRKYRLRELV TGIVLQATAF PVYIKASLLG
ILGVRGSFTV TPKAGSNGLP LRALWPHLAL IVLCTAAITW GVLRGVFEQE PLWALVVNTL
WCSYHLTLLL AVFYFNHQPQ EQTA