| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0196 |
|---|
| Symbol | |
|---|
| ID | 4710960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 229109 |
|---|
| End bp | 229525 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639854654 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001001792 |
|---|
| Protein GI | 121997005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0638518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC TGTCACTGAC CTGGCTCCAG GATGCCTATC CAATCCGCAG CCTCGAGCTG
CCCAAGGGCG CCCCGGGCCT GAGCTCTGCC GATGATCTGT TGGCGAAGCT GCGCAGTCGG
GTTGAAGCCG ACGAACGCGT CGCCTACATC GCCACCTTCG ACCACTACGA ACACACCGCT
AGCCTGCCCG ATGGTGAAAT CGCCGCAGGC ATTCACGACG CCAAGAACTT GGTGTTCTGC
GTTGGCCGGC GCCTCCCCAT GGCCTTGGCC CCTGCCGTTC GCCCCCGCTC GATCGGGGTG
GTGACGTTGG ACGACCGCTT TGTCGTCAGC TTCATGGAGT CACCGATGCC TCTGGCCAAC
GAAATCATGA CCCAGTGGCT CCACGAACTC GCCGAGGAGG TGAAGGCCGA GGCCTAG
|
|---|
| Protein sequence | MSELSLTWLQ DAYPIRSLEL PKGAPGLSSA DDLLAKLRSR VEADERVAYI ATFDHYEHTA
SLPDGEIAAG IHDAKNLVFC VGRRLPMALA PAVRPRSIGV VTLDDRFVVS FMESPMPLAN
EIMTQWLHEL AEEVKAEA
|
|---|
| |