Gene Hhal_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0115 
Symbol 
ID4710738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp130439 
End bp131044 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID639854573 
ProductNUDIX hydrolase 
Protein accessionYP_001001711 
Protein GI121996924 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCG CTGCGGCCGG AACGGCCTGC TGCCCGGAGG CCCTGCGGGC CCGACTGATG 
GGGCGGGCCT GGCCGGAGCG GGGGTGGCGC CGATCCCCCG GATCTCCGGT CCCAGCGGCG
GTGCTGATCG CCCTGCTCGA ACCGCAGGGT GCGTCGCGGA TCCTTCTGAC CCGGCGCGCC
GGGGGGCTGC GCGATCACCC GGGGCAGGTG AGCTTCCCCG GTGGCCGAGT CGATCCCGGT
GATCCGACGC CGGAGGCGAC CGCCCTGCGC GAGGCCCACG AAGAGGTCGG CCTCGATCCG
GGTGTGGTGC ATATTCTGGG TCGGCTCGGT CGCTATCACA CCGGGACCGG CTTTGTGATC
CAGCCGGTGG TGGCGGCGGT GCGTGAGCCG GTTGCCTGGT CTCCCTGTGA GGGCGAAGTC
GAGGCGGTCT TCGAGCTGCC GCTGGAGCGG CTCCGGGAGG GGCGGGTCGA CGGCGAGGTC
CGCGTGCCCG ACCCCCTCGG TCGGGTCCAG CGCTTTCCAG CGATGATCCA TCAGGAGCAG
CTGATTTGGG GGGCGACAGC AGGTATGCTC TGGCAACTCC GAGAAGCATT ACAGGGCATA
GGCTAA
 
Protein sequence
MPRAAAGTAC CPEALRARLM GRAWPERGWR RSPGSPVPAA VLIALLEPQG ASRILLTRRA 
GGLRDHPGQV SFPGGRVDPG DPTPEATALR EAHEEVGLDP GVVHILGRLG RYHTGTGFVI
QPVVAAVREP VAWSPCEGEV EAVFELPLER LREGRVDGEV RVPDPLGRVQ RFPAMIHQEQ
LIWGATAGML WQLREALQGI G