| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0110 |
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| Symbol | |
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| ID | 4710605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 126997 |
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| End bp | 127983 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854568 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001001706 |
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| Protein GI | 121996919 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC AGCCGGGCGT TCACGGTCGC TTGAGCGTTG CTCCGATGAT GGAGTGGACC
ACGCCGGCTG CGCGCTATTT CCTGCGCCTG TTGGCACCGC ATGTGCGTCT CTACACCGAG
ATGGTGCCGG CCGTGGCGCT CTGGCATGGC GCTGCGGAGC GTTTCCTGCC GTTTCACCCT
GCGGAGCACC CGGTCGCGGT GCAGTTTGGC GGCAGCGATC CCCAGGAGCT GGCCTACGCA
GCGCGGCTCG CCGAGCAGTG GGGGTATGAC GAGGTCAACC TCAACGTCGG CTGCCCCAGT
GACCGTGTGC AGTCGGGGCG TTTCGGGGCG TGTCTGATGC TTGAGCCGTC GCGGGTCGCC
GATTGCGTGG CCGCCATGCG GGCAGAGACG AACCTCCCGG TGACCGTCAA GTCGCGCATT
GGTGTCGATG AACACGACAG CGAGTCGTTC CTCGACGCCT TCGTGGAGAC TGTGGCTGCA
GCCGGTTGCC GGACTTTCAT CGTCCATGCC CGCAAGGCGT GGCTTGCCGG GCTCAGCCCC
AAGGAGAACC GAGAGGTCCC GCCGCTCGAT TATCAGCGGG TGCACCGGCT CAAGGCGCGA
CGGCCGGAGC TGGAGGTGGC GATCAACGGT GGGATCGCCG ACACGGTGAC GCTGCAGGAG
CAGCTGCAGT GGGTCGACGG GGTGATGGTC GGCCGCGAGG CGTTCTCCAA CCCCTACGCC
CTGGCGCATT GGGATCGCCT GCTGTTCGGC GGCGAGCTAC CTGAACGCCG GGGGGTCGTG
GTGGCGTATC TGCCGTATGT CGAGGCACGC CGACGCGAGG GGGTGCCCAT GAGTCAGCTG
GTCAAAGTGC TCATGGGGCT GTTCAACGGC CTGCCCGGTG CCCGCGCCTG GCGGCGGACC
CTGACCGAGG GCAGCCAGCA GCCGGGGGCC GGCCCCGAGG TCATCGAGCG GGCTCTGACG
TGTGTGACCG CGGGGCAGGC GGCGTGA
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| Protein sequence | MTEQPGVHGR LSVAPMMEWT TPAARYFLRL LAPHVRLYTE MVPAVALWHG AAERFLPFHP
AEHPVAVQFG GSDPQELAYA ARLAEQWGYD EVNLNVGCPS DRVQSGRFGA CLMLEPSRVA
DCVAAMRAET NLPVTVKSRI GVDEHDSESF LDAFVETVAA AGCRTFIVHA RKAWLAGLSP
KENREVPPLD YQRVHRLKAR RPELEVAING GIADTVTLQE QLQWVDGVMV GREAFSNPYA
LAHWDRLLFG GELPERRGVV VAYLPYVEAR RREGVPMSQL VKVLMGLFNG LPGARAWRRT
LTEGSQQPGA GPEVIERALT CVTAGQAA
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