| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4701 |
|---|
| Symbol | |
|---|
| ID | 4695201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5190030 |
|---|
| End bp | 5192552 |
|---|
| Gene Length | 2523 bp |
|---|
| Protein Length | 840 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639852445 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_999416 |
|---|
| Protein GI | 121611609 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.676085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.601296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCCCA ACTACCGCCC GCTGTGGATC GGCGCCATCG CTTTGGTCGT CGCTCCCTTC
CTGCTGCAGG CCCTGGGCCT GACGCTCACC TCCTCGACCG ACGTGGTGAT CTTCGCAATC
GCCGCGATGG GCCTGAACCT CCTGGTGGGC TACACCGGCC TGACCTCGTT CGGCCACGGC
GCCTGGTTCG GCATCGGCGC CTACGCCGCG GCGCTGTTCC AGAAGCACTG GCTACCGGGC
CAGTTCGTGC TGCCGCTGCT GCTCGCGGTG CTGTTCATCG CCTGCGGCTC GACGGCCATC
GGCTTGCTGA TCCTGCGCCG GCGAGGCGTG TATTTCTCTC TGCTCACGCT GGCCCTGTCG
GCCTTGACCT TTGCGATCGC CTTCCGCTGG ACCGCCCTCA CGGGCGGCGA ATCCGGCCTG
GGCGGCGTGG TGCGCCCCGC CATCGGCCCT GTGAACCTGG ACGATCCGCT GGCTTACCTG
GTCCTGGTCA GCCTCATTGG CTGGGGCGTG CTCTACCTGC TGCTGCGCGT AGTGCGCTCG
CCGTTCGGCC ACACGGTGGT GGCGATCCGC GAGAACGAGC AGCGCGCCAC CTTCCAGGGC
TACGACACGA GCCGCTACAA GCTGACCATG TTCGTGCTGT CGGCCACTGT GACCGGACTG
GCCGGTGCGC TGATGGTGTT CCACCACCGC TTCGCATCGG CGGAGCCAAC CTCGGTGGCG
TTCTCCGGCG AACTGCTGGC CATGGTAGTG ATGGGCGGTA TGCGCAGCTT CCTCGGGCCG
GCACTGGGCG CGCTGTTCTA CATGCTGTTC CGCGAGTTCC TCTCGATCTG GACCGGCAAC
TGGCTGCTCT GGTTCGGGCT CGCCTTCGTC GGCTTCATCC TGTTCTCGCC GACCGGGCTG
GTGGGCGTCT GGAGCCGCCT GACACGGCGC TGGCAGCCTC CGTTGGAAGT GGGCGCAGCC
ATGGGCCAGC GCCAGATCTT CGAAGGGCTG CCGCTGCCGG GCTTCCTGCG GCCCAAGGCG
CAAGAAGGAC TGGTGCTGGA AGTGCGCGAC GTCGCCAAAC GCTTCGGCGG AATCCATGCC
GTCGAGTCCG CGAGCTTGAC GCTGCACGCG GGCCAGATCC ACGCGCTGAT CGGCCCCAAT
GGCGCAGGCA AGACCACCAC CTTCAACCTG ATCTCCGGGA TGTTCGCGCC CAGCAACGGC
TCGGTACGCC TGCACGGCCA TGAGATCCAG GGCCTGGCGC CGCAGCAGAT CTGCCAGCAG
GGCCTGGCAC GCTCGTTCCA GATCACCAAC CTGTTCCGCG GCCTGTCGAT CTACGAGAAC
CTGCGCCTGT CGCTGCAGGC GCGGCACCCC GCGCGCTTCA ACATGTGGCG CGACATCGAC
CGCTACCCCG AGATTCATGC CGAAACGGGC GAGCTGATGA AATTCCTCGG CCTGCAGGGC
ATCGAGCAGA TCGAAGGCGG CGCGCTATCG TATGGCGGCC AGCGCCTGGT CGATCTGGGC
ATCGCGCTGG GCTCCAAGCC GCAGGTACTG CTGATGGACG AACCACTGGC CGGCTTGGCC
GCTGCCGAGC GCGAGCGGGT GTCGCACCTG GTCAAGACCA TCGCCAGCAA CATCCCGGTG
CTGATCGTCG AGCACGACAT CGACCGCGTG CTGGGCTTGT CGCAGCAAGT CACGGTCATG
AACCAAGGCA GCGTGTTGAT GACCGGCACG CCGGCCGAGG CCCGTGCCGA CCAACGCGTC
CAGGAGATCT ACACCGGCAC GGGCACGCCG CCCGTCACCG GACGCGTCGC CGGCGATGCG
CAGGACCGGC CGCAGTTGCT GCGCTTCGAG GCGGTGAACG CTTTCTATGG CAAGAGCCAC
ATCCTCGATG ACGCCACGCT GGAGGTGCGC GAAGGCGAGA TCGTCGCACT GCTGGGGCGC
AACGGCGCGG GCAAGTCGAC GCTGCTCAAG ACCCTCACCG GCTTGCTCAA GCCGGCGTCG
GGACGCATCG AGTACGCCGG GCGCGACATT GCCGGCTTGT CGGCGCCCGA CATCGCGCGC
ATGGGCATCG GCTATGTGCC GCAGGGGCGC GGCCTGTTCT CGGGCATGAC GGTGGCGGAG
AACCTCTCGC TCGGCCGGCT GGCGCGCAAG ACCGATGGCA GCACGGGCAC GGTGTGGAGC
GAAGAAAAAA TCCTGCAGTA CTTCCCGCGC CTGAAGGAGC GCCTGCACAC CCACGCCGAC
TTCCTCTCGG GCGGCGAGCA ACAGATGGTG GCCGTGGCGC GGGCGCTGTC GGGCAACGTG
CGCCTGCTGC TGCTCGACGA GCCCTTCGAG GGTCTGGCGC CGGCCGTGGT GCAGGAGCTG
TTCACAGTGT TCGACCGGCT GCGCAAGGAG GTGGCGATCG TCATCGTCGA GCACAACCTC
GACCTGGTGC TGGCGCTGGC CGACCGCGTG TTCGCGTTGG AGCGCGGCGC TGTGTTCCAC
ACCGGACCGG CCGCGCCGCT GCTGACCGAT CTCACCTACC GCAAGCAAAT TCTCTGGCTC
TGA
|
|---|
| Protein sequence | MNPNYRPLWI GAIALVVAPF LLQALGLTLT SSTDVVIFAI AAMGLNLLVG YTGLTSFGHG
AWFGIGAYAA ALFQKHWLPG QFVLPLLLAV LFIACGSTAI GLLILRRRGV YFSLLTLALS
ALTFAIAFRW TALTGGESGL GGVVRPAIGP VNLDDPLAYL VLVSLIGWGV LYLLLRVVRS
PFGHTVVAIR ENEQRATFQG YDTSRYKLTM FVLSATVTGL AGALMVFHHR FASAEPTSVA
FSGELLAMVV MGGMRSFLGP ALGALFYMLF REFLSIWTGN WLLWFGLAFV GFILFSPTGL
VGVWSRLTRR WQPPLEVGAA MGQRQIFEGL PLPGFLRPKA QEGLVLEVRD VAKRFGGIHA
VESASLTLHA GQIHALIGPN GAGKTTTFNL ISGMFAPSNG SVRLHGHEIQ GLAPQQICQQ
GLARSFQITN LFRGLSIYEN LRLSLQARHP ARFNMWRDID RYPEIHAETG ELMKFLGLQG
IEQIEGGALS YGGQRLVDLG IALGSKPQVL LMDEPLAGLA AAERERVSHL VKTIASNIPV
LIVEHDIDRV LGLSQQVTVM NQGSVLMTGT PAEARADQRV QEIYTGTGTP PVTGRVAGDA
QDRPQLLRFE AVNAFYGKSH ILDDATLEVR EGEIVALLGR NGAGKSTLLK TLTGLLKPAS
GRIEYAGRDI AGLSAPDIAR MGIGYVPQGR GLFSGMTVAE NLSLGRLARK TDGSTGTVWS
EEKILQYFPR LKERLHTHAD FLSGGEQQMV AVARALSGNV RLLLLDEPFE GLAPAVVQEL
FTVFDRLRKE VAIVIVEHNL DLVLALADRV FALERGAVFH TGPAAPLLTD LTYRKQILWL
|
|---|
| |