| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4687 |
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| Symbol | |
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| ID | 4694581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 5175251 |
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| End bp | 5176321 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639852431 |
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| Product | ABC spermidine/putrescine transporter, periplasmic ligand binding protein |
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| Protein accession | YP_999402 |
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| Protein GI | 121611595 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.616016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTC CTATTCCTAC GAATCACGGT CGTCGCAAGT TCCTGCAGAC CACGGGCGCA
GCGGCCGCAT CGGCAGCGAT CGGTCTGCCG ATGCTGGCCA CGCCGCGCCG TGCATCCGCC
GCCGAGAAGC TGGTCGTCGT CAGCTGGGGC GGCAACTACC GCACCGCCGT GGAAGAGGCG
CTCGTGCGCC CCTTCGAGAA GGAATTCGGC GTCGCCGTTA CGCTGGTCGA CACGCCGGAC
CTCGCTAAAG TCAAGGCGCA GGTCATGACC AAGAACGTCG AATGGGACGT CTTCGACGCG
GTCGGCCCGA TGGCCATGAC CGGATCGAAG GCCGGCTACT GGGAGACGCT GGACCCGGCG
CTCTTCGACC GCAACGATCT GGTCGCACCG ATGACCAAGG AAGCCGTGCC CTTCTACGGC
TTCACCGGCG GCATCTTCTG GGATGCCAAG AAGTTCCCGG AAGGCAAGGC ACCGCAAACC
TTCGCCGACT ACTTTGACGT GACGAAATTC CCCGGCAAGC GCACGCTGCG CAACCGCGCG
AGCGAGACGC TCGAGATCGC GCTGTTGGCC GACGGCGTGG CGCCGGACAA GATGTACCCG
CTCGACGTTC CGCGTGCCTT CAAGGCCCTT GAGCGCATCA AGCCGCACAT CGCGAAGTGG
GTCGACCAGA CGCCGCAGAC CACGTCGCTG GTCGAAACCG GCGAAGTGGA CTACAGCTAC
ACCTACGCGA CCCGCGCCAA GGCATCGCAG GAGTCGGGCA AGCCGACGCA GTTCTCCTTC
AAGCAGAACC TGATCGGCCT CGAGTACCTG GTCGTGCTCA AAGGCGCGCC GAACAAGGCG
AACGCGATGA AGTACGTCCA GTTCGCGCTG CGTCCCGACC GCCAGGCCGC GCTGATGGAC
CTGCACGGCA ATACGCCGGC GAGCAAGAAG GCGCGCGCGC TGATGAAGCC CGGGGTGAGC
AAGTGGCTGT CCGACCCGCA GAACAAGAAC AACCTGCTGA GCAACGACGC CTGGTGGGCC
GACCACTACG ACGAACTCAC GCTGAAGTTC AAAGAGTGGG TCCTGAGCTG A
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| Protein sequence | MSSPIPTNHG RRKFLQTTGA AAASAAIGLP MLATPRRASA AEKLVVVSWG GNYRTAVEEA
LVRPFEKEFG VAVTLVDTPD LAKVKAQVMT KNVEWDVFDA VGPMAMTGSK AGYWETLDPA
LFDRNDLVAP MTKEAVPFYG FTGGIFWDAK KFPEGKAPQT FADYFDVTKF PGKRTLRNRA
SETLEIALLA DGVAPDKMYP LDVPRAFKAL ERIKPHIAKW VDQTPQTTSL VETGEVDYSY
TYATRAKASQ ESGKPTQFSF KQNLIGLEYL VVLKGAPNKA NAMKYVQFAL RPDRQAALMD
LHGNTPASKK ARALMKPGVS KWLSDPQNKN NLLSNDAWWA DHYDELTLKF KEWVLS
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