| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4599 |
|---|
| Symbol | |
|---|
| ID | 4693359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5094651 |
|---|
| End bp | 5095382 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639852344 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_999315 |
|---|
| Protein GI | 121611508 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.279562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.65455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC CGCGCTTCAC CGACATTGCC CGCCATCTCG AGGAGGGCAT CGCCTCGGGC
CACTTCCCGT TGGGCTCGCT GTTGCCGACC GAGCTCGAGC TGCGCGACCA CTACCAGACC
AGCCGGCATA CGGTGCGCAT GGCGCTGCAG GCGCTGCAGG ACGCGGGGCT GGTATCGCGG
CGCAAGAACG TAGGCACGCG CGTGGAGTCG GCGGTGGCGC GCGCGGGCTT CCAGCAGTCG
CTGGCGTCGG TGGAAGACCT CATGCAATAC GGTGCCGCGC ACCTGCGCCT GGCGCCCGAG
ATCGACACCA TCTCGAGCAA TGCCGCGCTC TCTCGGCTGC TGGGGTGCGC GGCGGGAACG
CGCTGGCTGC GAATCTCGGG CATGCGCATG GAGGCAGGCC CGCAGGGCCT GCCTCTGGGC
TGGACCGACA TCTACGTCGA CACCAAGTAC GAGGCGCTCG AAGCACATGT GCGTGCCGCC
CCCGACACAC TGCTCAGTGC GCTCATCGAG CAGCACTACG GCCTGCGCGT GGCCGAGATC
GTGCAGCAGG TGCGCGCGGT CGACGCGTCG GCCGCGATGG CCAAGCGACT GCACGTCGAG
GCTGGCAGCG CGACGCTGCA GATTCTGCGG CACTACCTGG ATGCGGACGG CGGGGTGCTC
GTGCGTTCAG TGGCCACGCA CCCGGGCGAG CGCTTCTTCT TCACGACACG GCTGCAGCGG
GCCAAGGGCT GA
|
|---|
| Protein sequence | MNKPRFTDIA RHLEEGIASG HFPLGSLLPT ELELRDHYQT SRHTVRMALQ ALQDAGLVSR
RKNVGTRVES AVARAGFQQS LASVEDLMQY GAAHLRLAPE IDTISSNAAL SRLLGCAAGT
RWLRISGMRM EAGPQGLPLG WTDIYVDTKY EALEAHVRAA PDTLLSALIE QHYGLRVAEI
VQQVRAVDAS AAMAKRLHVE AGSATLQILR HYLDADGGVL VRSVATHPGE RFFFTTRLQR
AKG
|
|---|
| |