| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4596 |
|---|
| Symbol | fumC |
|---|
| ID | 4693693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 5090749 |
|---|
| End bp | 5092140 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639852341 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_999312 |
|---|
| Protein GI | 121611505 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.935917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.74642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCA TGCGCATCGA GTCCGACGCA TTCGGGGCGA TCGAGATTCC TGCCGACCGC
TACTGGGGCG CGCAGACCCA GCGTGCGCTG GGCGTCTTCG AGATCGGCGA AGAGCGTTTC
CCGGCATGCC TGATCCATGC CTTCGGCTTG CAAAAGATGG CCGCGGCACG CGCCAACCTG
CGCTGCGGCG CGCTCGATGC AGCCAAGGCT GCGCCGATCA TCGAAGCCGC AACCGAGCTG
CGGGGCGGTC GCTTCGATGA TCACTTCCCG CTGACCGTGT GGCAGACGGG CTCCGGCACG
CAGACCAACA TGAATGCGAA CGAGGTCATC GCCAACCGTG CCAACGAGTT GCTGGGCCAG
CCGCTGGGCA CCAAGTCGCC GGTGCATCCG AACGACCATG TCAATGCATC GCAGTCGTCG
AATGACAGTT TCCCGACGGT GATGCACATC GCCACCGTGC TTGAAATCAC GCAACGGCTG
CGGCCCGCGT TGCAGTTGTT GCAAGACCGC CTGCGCGAAC GCAGCGAGGC CTTCGCGGAT
GTGCTGAAGG TCGCGCGCAC CCACCTGATG GACGCTGTAC CGATGACGCT GGGGCAGAGC
TTCGATGCCT TCGCGCGCCA GATCGGCCAC GGCATCGACC GCATCGACGC CACGCTGGCG
CGCCTGCATC TGCTGGCACA AGGCGGCACG GCGGCGGGCA CCGGGCTCAA CGCGCCGCGA
GGGTTCGACG CTGCGTTCTG CCAGGAGTTG AGCGCGCTGT GCGGCGCGGA CTTCGCCCCC
AACCCCAGCA AGTTCGAAGG CATGGCCTCG CACGATGCGC TGGTGGAAGT GTCGGGCGCG
CTCAACGTGC TCGCGACCTC GCTGGTGAAG ATGGCCAACG ACGTGCGATT GCTGGGTTCC
GGGCCTCGCT GCGGGCTTGG CGAGCTGCGC ATTCCCGACG ACGGTCTTAC GAGCTCGATC
ATGCCGGGCA AGCGAAACCC GAGCATCGCC GAGGTGGTGG TGCAGGCCGC GCTGCAGGCG
ATGGGCAACC ACGTGACCAT CACCATGGCG GGCGCCTCGG GCAACTTCGA ACTCAACGTG
GCCAAGCCGT TGATCATCCA GAACCTGCTG CAATCGATCC GCGTGCTGGC CGATGCGTCC
CGCGTGTTCG CCGAGCGACT GGTCAAGGGC ATAGAGCCCG ATCGAGCGCG GCTTGCGTCG
AACGTTGATA ACGCGCTGCT GGCGGTGACG GCCTTGAACC CCGTGCTGGG CTACGACCGT
GTGGCGGGCA TCACGCGCGC GGCGCTGGCG CAAGGCATCA CCCCGCGGGC GGCCGCCATT
GCTTTGGATC TGCTCAGCGG CGATGAGTAC GACCGGCTCG TCGATCCTGC GGCGATGGCG
GGTCACGCTT GA
|
|---|
| Protein sequence | MTAMRIESDA FGAIEIPADR YWGAQTQRAL GVFEIGEERF PACLIHAFGL QKMAAARANL
RCGALDAAKA APIIEAATEL RGGRFDDHFP LTVWQTGSGT QTNMNANEVI ANRANELLGQ
PLGTKSPVHP NDHVNASQSS NDSFPTVMHI ATVLEITQRL RPALQLLQDR LRERSEAFAD
VLKVARTHLM DAVPMTLGQS FDAFARQIGH GIDRIDATLA RLHLLAQGGT AAGTGLNAPR
GFDAAFCQEL SALCGADFAP NPSKFEGMAS HDALVEVSGA LNVLATSLVK MANDVRLLGS
GPRCGLGELR IPDDGLTSSI MPGKRNPSIA EVVVQAALQA MGNHVTITMA GASGNFELNV
AKPLIIQNLL QSIRVLADAS RVFAERLVKG IEPDRARLAS NVDNALLAVT ALNPVLGYDR
VAGITRAALA QGITPRAAAI ALDLLSGDEY DRLVDPAAMA GHA
|
|---|
| |