Gene Veis_4518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4518 
Symbol 
ID4694472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4998835 
End bp4999662 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID639852263 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999235 
Protein GI121611428 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0534801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAGA AGATAACGCT GGCCCGGGCC GCGCCGACGA CACTGCTGGT ACTCTGGCTG 
ATCCCCACGC TGTTCCCGTT TTACTGGATG CTGAAGTCGG CCCTGGGCCA CGCGCAGGAC
GTGTACAAAC CGTCGCTCGG CATACAAAAC GCATCACTCG ATAATTTCGT CAGCCTTCTA
TCGAGCACCC ACTTCCTTGC CAACGCGACC AACAGCCTGA AGGTCGCGCT GGCCGCCGCA
TGCGTGGTGA TGGCGTGCAG CGCGTTGGGC GGCTACGCGC TGGCGCGCAT GCGTTTCAAA
CACAAGACAC TGCTCGCGCA GGTGGTCCTG TTCTCCTACA TGTTCCCGGA AATCTTGCTG
GGCATCCCGT TTTTTGCGAT GTTCCAGAAG ATCGGACTGC TCAACTCGCT GTCCGGGTTG
GCCTTGGCGC ATGTCACGCT GAGTCTACCG TTCGGTCTGT GGTTGATGTG GCAGTTCTAT
CAGTCGTTGC CGATGTCATA TGAAGAAGCC GCGCAGATCG ACGGCGCGAG CAAGTTCCAG
ACCTTTTATC GCATCATGCT GCCGCTTTCA ATTCCGGCGC TGGCTGCAGT ATTCATTTTT
GGCTTTGCGG CTTCGTGGAA CGACTATGTC CTGGGCCTCA TGCTGATCCG CGACGACCAG
ATGTTCACGC TACCGATCGC CATGAGCCTG TTCGTGCAGC AGATGGATTT GAACTGGGCG
CTCATCCAGG CTGCCAACGT GCTTTTGGCA CTGCCTGGGC TGCTGCTTGT GTTGTTCGGT
CAAAAGTACC TCGTGCGTGG CTTGCAGACC AGCGGTCTGG CGAACTGA
 
Protein sequence
MAKKITLARA APTTLLVLWL IPTLFPFYWM LKSALGHAQD VYKPSLGIQN ASLDNFVSLL 
SSTHFLANAT NSLKVALAAA CVVMACSALG GYALARMRFK HKTLLAQVVL FSYMFPEILL
GIPFFAMFQK IGLLNSLSGL ALAHVTLSLP FGLWLMWQFY QSLPMSYEEA AQIDGASKFQ
TFYRIMLPLS IPALAAVFIF GFAASWNDYV LGLMLIRDDQ MFTLPIAMSL FVQQMDLNWA
LIQAANVLLA LPGLLLVLFG QKYLVRGLQT SGLAN