Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4190 |
Symbol | |
ID | 4692440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4614887 |
End bp | 4615735 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639851937 |
Product | LysR family transcriptional regulator |
Protein accession | YP_998913 |
Protein GI | 121611106 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0252504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.417297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACGC GTGATCTGGA CATGGGACTG CTGCGAACTT TCGTGGCCGC AGCGGAGCGC GAGAGCTTCG CGGTCGCGGC GGCGCGCGTG TTTCGCACGC AGGCTGCCGT CTCGCTGCAG ATGCAGCGGC TCGAAGCGGT GGTGGGCTGC GCGCTGTTCA CGCGCGTAGG GCGCAACAAG CGCTTGAGCG ACCAGGGCGT GCGGCTGCTG GAGTACGCGA GGCGCATCCT GAGCCTGAAC GACGAGGCCT ACCGCGCGAT AACGCAGGAG GTCTTCGAGT CCCCCGTGAA GATCGGCGCC TGCGCCGACG CGGTCGACAC GCTGATGCCC GAGTACCTGG AGATGTGCGC CGAAACCTAC CCGAGCCTGC GCATCGACAT CCAGGTCGGG CGCAGCCGCT GGCTTGCATC GGCGCTGCGG CGGGGTGATG TTGACCTGGT GGTCGACGTG GCGCCGCACG AAGAGTTTCA TCACGTCGTG CTGCGCACCT CGCCCGTGGT GTGGTTGGCC GGCGCGCGCT TTCATTACCA GCAGAATCTG GCGCTGCCGC TGGTGCTGAT CGACTCGGCC TGCCCGTTCC GCGGCATGGC GCTGGAGGCG CTGGCACAGC AGGAGCGCAA CTGGCGCCCG ACCTTCCAGA CCTCGACGCT GGCCGGCATC CGCGCGGCGT TGCGCGCGGG GCTCGGCATC ACGCCGCGCA CCATTGAGAT GCTGACCTCC GACATGAAGG TGGTCGATCA TGAGCTGGGC CTGCCGCCGC TGCCGTCGAT CGGCTACCGG CTCTATTCGC GCGTGAACGA CTGCAGCGAG AGCGCGCAGA AGTTCAGCGC ATTGATCGCA CCGCGCTGA
|
Protein sequence | METRDLDMGL LRTFVAAAER ESFAVAAARV FRTQAAVSLQ MQRLEAVVGC ALFTRVGRNK RLSDQGVRLL EYARRILSLN DEAYRAITQE VFESPVKIGA CADAVDTLMP EYLEMCAETY PSLRIDIQVG RSRWLASALR RGDVDLVVDV APHEEFHHVV LRTSPVVWLA GARFHYQQNL ALPLVLIDSA CPFRGMALEA LAQQERNWRP TFQTSTLAGI RAALRAGLGI TPRTIEMLTS DMKVVDHELG LPPLPSIGYR LYSRVNDCSE SAQKFSALIA PR
|
| |