Gene Veis_4190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4190 
Symbol 
ID4692440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4614887 
End bp4615735 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID639851937 
ProductLysR family transcriptional regulator 
Protein accessionYP_998913 
Protein GI121611106 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0252504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC GTGATCTGGA CATGGGACTG CTGCGAACTT TCGTGGCCGC AGCGGAGCGC 
GAGAGCTTCG CGGTCGCGGC GGCGCGCGTG TTTCGCACGC AGGCTGCCGT CTCGCTGCAG
ATGCAGCGGC TCGAAGCGGT GGTGGGCTGC GCGCTGTTCA CGCGCGTAGG GCGCAACAAG
CGCTTGAGCG ACCAGGGCGT GCGGCTGCTG GAGTACGCGA GGCGCATCCT GAGCCTGAAC
GACGAGGCCT ACCGCGCGAT AACGCAGGAG GTCTTCGAGT CCCCCGTGAA GATCGGCGCC
TGCGCCGACG CGGTCGACAC GCTGATGCCC GAGTACCTGG AGATGTGCGC CGAAACCTAC
CCGAGCCTGC GCATCGACAT CCAGGTCGGG CGCAGCCGCT GGCTTGCATC GGCGCTGCGG
CGGGGTGATG TTGACCTGGT GGTCGACGTG GCGCCGCACG AAGAGTTTCA TCACGTCGTG
CTGCGCACCT CGCCCGTGGT GTGGTTGGCC GGCGCGCGCT TTCATTACCA GCAGAATCTG
GCGCTGCCGC TGGTGCTGAT CGACTCGGCC TGCCCGTTCC GCGGCATGGC GCTGGAGGCG
CTGGCACAGC AGGAGCGCAA CTGGCGCCCG ACCTTCCAGA CCTCGACGCT GGCCGGCATC
CGCGCGGCGT TGCGCGCGGG GCTCGGCATC ACGCCGCGCA CCATTGAGAT GCTGACCTCC
GACATGAAGG TGGTCGATCA TGAGCTGGGC CTGCCGCCGC TGCCGTCGAT CGGCTACCGG
CTCTATTCGC GCGTGAACGA CTGCAGCGAG AGCGCGCAGA AGTTCAGCGC ATTGATCGCA
CCGCGCTGA
 
Protein sequence
METRDLDMGL LRTFVAAAER ESFAVAAARV FRTQAAVSLQ MQRLEAVVGC ALFTRVGRNK 
RLSDQGVRLL EYARRILSLN DEAYRAITQE VFESPVKIGA CADAVDTLMP EYLEMCAETY
PSLRIDIQVG RSRWLASALR RGDVDLVVDV APHEEFHHVV LRTSPVVWLA GARFHYQQNL
ALPLVLIDSA CPFRGMALEA LAQQERNWRP TFQTSTLAGI RAALRAGLGI TPRTIEMLTS
DMKVVDHELG LPPLPSIGYR LYSRVNDCSE SAQKFSALIA PR