| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4144 |
|---|
| Symbol | |
|---|
| ID | 4694778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4556822 |
|---|
| End bp | 4559167 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639851891 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998867 |
|---|
| Protein GI | 121611060 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02059] cyanobacterial long protein repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.612931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCA CCATCAGGAT CAACAAGCCC ATCGTCAGAG CCGGCGAGAC CGCCTGGGTC
ACCTTTACTT TCATCAATAA CGAGTACATG CGCATCGATG GGGATCAGAT TCGTGACGTG
ACCGTCACCG GCGGCACGCT GAGTGCCGAT TCCCTCGGAG TGCATACCAT CGTTTCAAAC
AACATATCCT TCAAAGCCAG ATTCACACCG ACCCCGAACC TGGAGAAATC CGACTGCAAA
ATCCGCTACA ACGGCTCCGG CGATATCGCC GATGGAGAGC TCACCTTCGC CGTCGACACC
CTGCGGCCCA CCGTTGCCAG TGCCTCGATC GCCAAAAGCG ACCTGCGCCT CGGGGAAAAA
ACCACCATCA CCATCACCTT CAGCGAACGG GTGCTGCGCG ACACCTTCAC GCTCGATGAC
CTGCAGGTGG ACGCCGGCAA GGGCACTTTG AGCAACCTGC GCGTCGCCCC CTCCGACACC
ACGGCCACCA CCACCGCCGC CACCACCTGG CTGGTCGACC TGGAGGCCCC GGCCACCCGG
CCCGCGACGG GCCTCGATGG CAACCAGATA CGGATCAACC TCGACGACAT CACCGATGTC
CCGGGCAACG CAGGCGCAAG CCGGGGGGTG AGCCTCGCCC GCTACAACAT CGACGCGCCG
CCCACGGTCG CCATCACGGG CCAGCCCGCC ACCCTCAAGA TCGGCGAGTC CTTCACCGTC
ACCTTCACCT TCGACGAGCG CGTCACCGGC TTTGGTGCCG AGGACATCCA GTACGACACC
AGCAAAGGCA CGCTGGGCGC TCTGACGGCC GTCGGCACCG ACGGCAAGGT CTGGAGCGCC
AGCTACACGC CCCGGTCCGG CATCGAGAGC GCCGAAAACA CCATCCGCGT GAATCTCAGC
GGCGTCCGGG ACGTGCGGGA CAACGCCGGC GTGGGCACCG CCACCAGCGG CAACTTCAGC
ATCGACACCG TGCGCCCCAC GGTCAACGTG ACGATCAGCG ACGAGCGCCT CACCGCTGGC
GAAACCGCCA CCATCACCAT CACCTTCAGC GAGCGCGTCA CCGGCTTCAC GAAAGAGGAC
ATCGGCCTGT CCCGGGCCAA CGGCACGCTC GGCGACCTGA CCCCGGTCGG CACCGACGGC
AAAACCTGGA CCGCCACCTT CACCCCCACG GCCAACCTGG AGCGCCCCTA CCCCTCCACC
AACAGCCAGC TCACCCTGAA CCTGGCCAAT GTCAGGGATG CCGCAGGCAA CACCGTCGCC
AACAACACCT ACTCGCTCCG GTACACCGTA GACACCATGG TCTTTGCGCT CAGCAGCGCC
ACGGTGAACC GCGACCAGTT GGTGCTGGGC TACGGCGCCG AAACGGATCT CGACGGGAAC
GCAGACCGCG CCCCGACCAA CGAGTCCTTT ACCGTGCTGG TCGATGGCAC GCGCATCGAC
GTCAGCCGGG TGACGGTGGA TGCAGCGGCC CGGACGGTCA CGCTGACCCT GGCCCGCGCC
GTGGCTGCCG GCCAGCAGGT GAGCATCGCC TACCAGGACA CCGACACCAG CGACGGCAAA
GCGCTACAGG AGGTCAACGA CGGCGACGAC GCGGCCAGCT TCGCGGCCAC GCCGGTGACC
AACCTCACCC CGTCCCCGGT CGCACCCGCC ACACCGGAGG CGTCTGGGGC GTCTGGGGCG
TCTGGGGCGT CTGGAGGGTC TGGAGGGTCT GGAGGGTCTG GAGGGTCTGG AGGGTCTGGG
GCGCTGGACT CCGACTACGA CAGTGTGCCC AACGCCCAGG AGGACCAGGC CCCCGGCCTG
CTGCGCCCCG ATGGCTCGGC CGGCCCGGAT GGCGACGGCA ACGGCGACGG TATCCGGGAC
AGCCAGCAGG TCGCCGTCAG CTCGACCCGC GACCTGACCC TGGTGGCCGG CAGCCAGGAC
GGCAAACTGA TCCCCGGCAG CAATGCGCGC ATCACCGAAC TGGTGCGCAA CGAAGCCCCC
GCCAGCCTGC CCAAGGGCAT GGAAATGCCG ATCGGCCTGA CGCAATTCAG GGTCGGCCTG
TCCGAAGGCC GCTACACCGA GAGCTTCAGC CTGTACGTAG ACCCGGCGCT CGGCGTCAAC
GGCTACTGGG TCAAGGACAG CGCCGGCACC TGGGTGAACC TGGCCAGCGA ACCCTACGGC
GGCAAAATGA GCACCGAAGG CGGGCGCACG CGGCTGGACT TTGAGATTCA GGACGGCGGC
CAGTACGACG CCGACGGGCT GGCCGATGGC CACATCACCG CCCTTGGCGC CGCAGCGAAG
ATGCCGCTGT CCATCGTCGG GCAGGCGCCG CCCCAGGTCG AGTCGCAGGG GGGGTATTGG
TTCTGA
|
|---|
| Protein sequence | MASTIRINKP IVRAGETAWV TFTFINNEYM RIDGDQIRDV TVTGGTLSAD SLGVHTIVSN
NISFKARFTP TPNLEKSDCK IRYNGSGDIA DGELTFAVDT LRPTVASASI AKSDLRLGEK
TTITITFSER VLRDTFTLDD LQVDAGKGTL SNLRVAPSDT TATTTAATTW LVDLEAPATR
PATGLDGNQI RINLDDITDV PGNAGASRGV SLARYNIDAP PTVAITGQPA TLKIGESFTV
TFTFDERVTG FGAEDIQYDT SKGTLGALTA VGTDGKVWSA SYTPRSGIES AENTIRVNLS
GVRDVRDNAG VGTATSGNFS IDTVRPTVNV TISDERLTAG ETATITITFS ERVTGFTKED
IGLSRANGTL GDLTPVGTDG KTWTATFTPT ANLERPYPST NSQLTLNLAN VRDAAGNTVA
NNTYSLRYTV DTMVFALSSA TVNRDQLVLG YGAETDLDGN ADRAPTNESF TVLVDGTRID
VSRVTVDAAA RTVTLTLARA VAAGQQVSIA YQDTDTSDGK ALQEVNDGDD AASFAATPVT
NLTPSPVAPA TPEASGASGA SGASGGSGGS GGSGGSGGSG ALDSDYDSVP NAQEDQAPGL
LRPDGSAGPD GDGNGDGIRD SQQVAVSSTR DLTLVAGSQD GKLIPGSNAR ITELVRNEAP
ASLPKGMEMP IGLTQFRVGL SEGRYTESFS LYVDPALGVN GYWVKDSAGT WVNLASEPYG
GKMSTEGGRT RLDFEIQDGG QYDADGLADG HITALGAAAK MPLSIVGQAP PQVESQGGYW
F
|
|---|
| |