| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4060 |
|---|
| Symbol | |
|---|
| ID | 4694439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4453575 |
|---|
| End bp | 4454447 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639851807 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_998783 |
|---|
| Protein GI | 121610976 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0808444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.400177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC TGCTCGGCCG TGCCATCGAC GCCTTGCGCG AACTGCTGCC GCTCGGGCGC
TGGGTCAACG AAGGCGTCAA GCTGCTGCTC GACCATGGCG CCACCGTCTT CGATTCGGTG
GGCGTGATGG TCGAAGCCTT CGCCCAATGG ATAGAACAGG GCATGCTGGC GATTCCGTTC
TGGTTGACGA TTGCCGTCGT CAGCGTGATC GGATGGCGCC GCCTCGGCGC CGGCTTTGGC
ATGTTCGTGC TGCTGGCGCT GGCGCTGATC GTGGTCACCG GCTTCTGGCC GCAAACCATG
GTCACCTTGG CGCTGACCTT GTCGGCCACG CTGATCAGCC TGTTTTTTGG CATCCCGCTG
GGCATTGGCT GCGCCCGCAG CAACCGTGTG AACGCCTGCG TGCGCCCGGT GCTGGACTTC
ATGCAGACCA TGCCGGCCTT CGTCTATCTG ATACCCGCGG CCATGCTGTT TGGCCTGGGC
CGGGTGCCCG GAACGATCGC CACCGTGATC TTCGCCATGC CGCCGGTGGT CAGGCTCACC
AGCCTGGGCA TCCGCCAGGT GAGCACCGAG CAGGTCGAAG CCGGCAACGC CTTTGGCTGC
ACCTCGACCC AACTGCTGTT CAAGGTGCAA CTGCCGATCG CCATGCCGAC CATCATGGCC
GGTGTCAACC AGACCATCAT GATGGCCTTG TCCATGGTCA TCATTGCCTC CATGGTCGGC
GCCGGCGGCC TGGGCAACGA CGTGCTGGCC AGCATACAGC GGCTGGACAT CGGTCTGGGC
TTTGAAAGCG GCCTGGCGGT GGTGCTGCTG GCCATCATCC TGGACCGGCT CACCGAAAGC
TTCGGCGTGG CCCGCCGGGG CCGCGACAAC TGA
|
|---|
| Protein sequence | MSELLGRAID ALRELLPLGR WVNEGVKLLL DHGATVFDSV GVMVEAFAQW IEQGMLAIPF
WLTIAVVSVI GWRRLGAGFG MFVLLALALI VVTGFWPQTM VTLALTLSAT LISLFFGIPL
GIGCARSNRV NACVRPVLDF MQTMPAFVYL IPAAMLFGLG RVPGTIATVI FAMPPVVRLT
SLGIRQVSTE QVEAGNAFGC TSTQLLFKVQ LPIAMPTIMA GVNQTIMMAL SMVIIASMVG
AGGLGNDVLA SIQRLDIGLG FESGLAVVLL AIILDRLTES FGVARRGRDN
|
|---|
| |