Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4021 |
Symbol | |
ID | 4694498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4410219 |
End bp | 4410986 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639851768 |
Product | hypothetical protein |
Protein accession | YP_998744 |
Protein GI | 121610937 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.687307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTG CGACGAATAC CCCCTCCAGA GTGCTGCCCG AAGTCAGCGT GTCCGACGAC GGCCGGGTGC GCCACCTGCA TCTGGGCACC CCCTGGATCC AAGGCTCGAT GCGCATCGAC GAGCCGTTCG CGTTGGAACT GGAGTATGTG CAGCGCATGA TGGCCTGGCT GCTGTTCGCC GAGCCTGCGC GGGTCGCCAA AGGCCATGCG ATGCAACTGG GCCTGGGGGC CGGGGCCATC ACCCGGTTCT GCCACCGGCA ACTGCGCACC CGCACCACCG CCATCGAGCT CAATCCGCAG GTGCTGCTGG TGTGCCGGCA GTGGTTCAAA CTGCCCCCGG ATGGCCCCCG GCTGCAGGTG GTGCTGGCCG ATGCTGCGCA GGAGATCCGC CGCCCCCTGT GGCAGGGCAG CGTGGATGCG CTGGCGGTCG ATCTGTACGA CCACGAGGCG GCGGCGCCGG TGCTCGACAG TGCCGAGTTC TATGCCGATT GCCGCGCGCT GCTGACCGAT ACGGGTTGCA TGACGGTCAA CCTGTTCGGT CGGTCCATGC AGTTTGAACG CAGCCTGCAA AGCATCGCCG ATGCGTTTGG CGACCGGGCG CTCTGGGCGT TCACGCCGAC GCGCGAAGGC AATACGGTGG TGCTGGCGCA ACGCACGGCG ACGCGGCCCC GGCGTGCCGA GTTGCTCCTG CGGGCCGCCG TCATCGAGGC CCGCTGGGGA CTGCCTGGCG TCAAATGGCT GCGTTCGCTC AAGCCCGTGG TGGCTTGA
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Protein sequence | MSRATNTPSR VLPEVSVSDD GRVRHLHLGT PWIQGSMRID EPFALELEYV QRMMAWLLFA EPARVAKGHA MQLGLGAGAI TRFCHRQLRT RTTAIELNPQ VLLVCRQWFK LPPDGPRLQV VLADAAQEIR RPLWQGSVDA LAVDLYDHEA AAPVLDSAEF YADCRALLTD TGCMTVNLFG RSMQFERSLQ SIADAFGDRA LWAFTPTREG NTVVLAQRTA TRPRRAELLL RAAVIEARWG LPGVKWLRSL KPVVA
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