Gene Veis_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4021 
Symbol 
ID4694498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4410219 
End bp4410986 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID639851768 
Producthypothetical protein 
Protein accessionYP_998744 
Protein GI121610937 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.687307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTG CGACGAATAC CCCCTCCAGA GTGCTGCCCG AAGTCAGCGT GTCCGACGAC 
GGCCGGGTGC GCCACCTGCA TCTGGGCACC CCCTGGATCC AAGGCTCGAT GCGCATCGAC
GAGCCGTTCG CGTTGGAACT GGAGTATGTG CAGCGCATGA TGGCCTGGCT GCTGTTCGCC
GAGCCTGCGC GGGTCGCCAA AGGCCATGCG ATGCAACTGG GCCTGGGGGC CGGGGCCATC
ACCCGGTTCT GCCACCGGCA ACTGCGCACC CGCACCACCG CCATCGAGCT CAATCCGCAG
GTGCTGCTGG TGTGCCGGCA GTGGTTCAAA CTGCCCCCGG ATGGCCCCCG GCTGCAGGTG
GTGCTGGCCG ATGCTGCGCA GGAGATCCGC CGCCCCCTGT GGCAGGGCAG CGTGGATGCG
CTGGCGGTCG ATCTGTACGA CCACGAGGCG GCGGCGCCGG TGCTCGACAG TGCCGAGTTC
TATGCCGATT GCCGCGCGCT GCTGACCGAT ACGGGTTGCA TGACGGTCAA CCTGTTCGGT
CGGTCCATGC AGTTTGAACG CAGCCTGCAA AGCATCGCCG ATGCGTTTGG CGACCGGGCG
CTCTGGGCGT TCACGCCGAC GCGCGAAGGC AATACGGTGG TGCTGGCGCA ACGCACGGCG
ACGCGGCCCC GGCGTGCCGA GTTGCTCCTG CGGGCCGCCG TCATCGAGGC CCGCTGGGGA
CTGCCTGGCG TCAAATGGCT GCGTTCGCTC AAGCCCGTGG TGGCTTGA
 
Protein sequence
MSRATNTPSR VLPEVSVSDD GRVRHLHLGT PWIQGSMRID EPFALELEYV QRMMAWLLFA 
EPARVAKGHA MQLGLGAGAI TRFCHRQLRT RTTAIELNPQ VLLVCRQWFK LPPDGPRLQV
VLADAAQEIR RPLWQGSVDA LAVDLYDHEA AAPVLDSAEF YADCRALLTD TGCMTVNLFG
RSMQFERSLQ SIADAFGDRA LWAFTPTREG NTVVLAQRTA TRPRRAELLL RAAVIEARWG
LPGVKWLRSL KPVVA