Gene Veis_4010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4010 
Symbol 
ID4694654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4399372 
End bp4400145 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID639851757 
ProductABC transporter related 
Protein accessionYP_998733 
Protein GI121610926 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0825596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.159254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC AGACCGCGAC CGGCGCGCTG TCCGTGCGCG GCCTGTGCAA GCACTTCGGC 
GGCGTCGCCG CGCTGTCCGG CGTATCGATC GAACTGCGAC CGGGCGAGGT CCAGGGCCTG
ATCGGGCCGA ACGGCAGCGG CAAGACGACC CTGTTGAACA TGCTCAGCGG CTACTACCCG
ATCGACGAGG GCAGCATCCA CCTCGGCAAC GAAGACCTGA CGCGGGCTAC CGTGCAGCGC
CGCGCCTGCG CCGGCATCGC GCGCACCTTC CAGACGCCGC GCCTGCTGCC GACCCTGAGC
GCGCTCGAAA ACGTGATGCT CGGCGGCTGG CGCGATGCGC GCGCCGGCAT GATCGGCGCC
ATGCTCTCGT CGCCGCGCGC ACGGGCCGAG GACAAGCTGC TGTCTGAGCG CGCGCTCGAA
CTGCTCTGCG GCGTGGGCCT GGCCCATGCG CTCGACGAAC GCGCCGATGT GCTCAGGCAT
GGCGAGCAGC GCTTCCTGGA AATCGCGCGC GCCCTGGCGG CGCGACCGCG CTTCGTGTTG
CTGGACGAGC CGGCCGGCGG CCTGAGCGGC AACGAGATCG CCAGCCTGGG CGCAGTGCTG
GCGGCCCTGA AGAACTGCGG CATCGGCGTG CTGCTGGTGG AACACCACAC CGACTTCGTG
TTCCGGATCT GCGACCGGGT CACGGCCATC GACTTCGGCC GCGTCATCGT CTGCGACACG
CCCGACAAGG TGCGCGCCCA TGAAGATGTG GTGCGCGTCT ACCTCGGAGC CTGA
 
Protein sequence
MTMQTATGAL SVRGLCKHFG GVAALSGVSI ELRPGEVQGL IGPNGSGKTT LLNMLSGYYP 
IDEGSIHLGN EDLTRATVQR RACAGIARTF QTPRLLPTLS ALENVMLGGW RDARAGMIGA
MLSSPRARAE DKLLSERALE LLCGVGLAHA LDERADVLRH GEQRFLEIAR ALAARPRFVL
LDEPAGGLSG NEIASLGAVL AALKNCGIGV LLVEHHTDFV FRICDRVTAI DFGRVIVCDT
PDKVRAHEDV VRVYLGA