Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3984 |
Symbol | |
ID | 4694448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4371990 |
End bp | 4372802 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639851733 |
Product | regulatory proteins, IclR |
Protein accession | YP_998709 |
Protein GI | 121610902 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.104797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0879634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AATTTCGCCG CAGCGCTGCG AGCGCTGCTT CCCCGCCCAT CCTGGCCGAC GCAGCAGCCC CTGCCGCCGC CGTCGTCTCC GTCGTCTCCG TCAGACGCGC ACTGCAACTG CTCGACGCCT TCGCCTTGGG CGAATCACAG TTGTCGCTGG CCGTGCTGAG CCAGCGCTGC GCGTTGCACA AGACCACGGT GCTGCGTCTG GCACGCACGC TGGCACAAGC GGGCTACCTG GTGCAGCGCG AGGACGGCCC ATGGCGCCTG GGGCCGGCAA CGGGCTGGCT CGGTGCGCGC TACCAGGCCG GGTTTGACGT GCAAAACGTC CTGGAGCCGG CATTGCGCGC GCTCACCCAG TCCAGCGGCG AGAGCGCGGC CTTTTACGTG CGCGAGGGCC CGTTGCGTAC CTGCCTGGTG CGCGTGGAAG GCCCGCAGGC GCTGCGCCAC CATGCGCGTA TGGGCGAAGG CTTGCCGCTG GACAAAGGCT CGCCGGGCCG CGTGATCCTG GCGTTCTCGG GCGAGCCAGG CGCCGACTAC GAGGCGATCC GCCAGCGCGG CTACCACTGG TCGATTGGCG AGCGCGAGCA GGGCGTGGCC ACCGTGTCGG CGCCGGTGTT CGGGCCGCAT TGGCGGCTGC TGGGCTCGGT GTGCATTTCG GGGCCGGCGT CGCGCCTGCC GGTCAAAAAG CTGCAAGCGC TGGCGCCGAG CCTGATCGGC GCGGCCAACC GGCTGTCCCA TGCGCTCGCC GGCGCGGCGC TCACGCCGTC ACCCGCGTCG TCGTCCGCGC GGCCCGGCCA ATGGCATCCA TGA
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Protein sequence | MSKQFRRSAA SAASPPILAD AAAPAAAVVS VVSVRRALQL LDAFALGESQ LSLAVLSQRC ALHKTTVLRL ARTLAQAGYL VQREDGPWRL GPATGWLGAR YQAGFDVQNV LEPALRALTQ SSGESAAFYV REGPLRTCLV RVEGPQALRH HARMGEGLPL DKGSPGRVIL AFSGEPGADY EAIRQRGYHW SIGEREQGVA TVSAPVFGPH WRLLGSVCIS GPASRLPVKK LQALAPSLIG AANRLSHALA GAALTPSPAS SSARPGQWHP
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