Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3950 |
Symbol | |
ID | 4695277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4334740 |
End bp | 4335378 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639851699 |
Product | TetR family transcriptional regulator |
Protein accession | YP_998675 |
Protein GI | 121610868 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.390353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.629082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGAG GGCGATCTCC CGGATACGAC GAGCAGCGCG ACATGATCGC GCGCCATGCG GCCGCGCTGT TTGCGCAGCG CGGCTACCCT GCGACCTCGA TGAATGAGGT GGCCCAGGCC TGCGGCCTGT CCAAACCCAC GCTGTACCAC TACTTCAGGG ACAAGTACCA CCTGCTGCTG CATATCGCCG ACGACCATGT GTCGCGCCTG CAGGCGCTGG TCGACGACAT CGGGCAGCGC CAGTTGCCGC CCGAGCCACG GCTGCGCGCG TTGATCGAGC GCTTCGTGCA GGAATACGCG CAGGCCCGCG ATGCCCACCG CGTGCTGACC GAGGACGTGA AGTTTCTCCA GCCCGAAGAC AGCGCGCTGG TGCTGAACAA GGAGCGCGCC GTGGTGGCGG CCTTTGCCAA TGCGCTGGCG CAGATGCGCC CCGAGACCGA GGCTGCGGGC CTGACCAAGG CGCTGACGAT GCTGCTGTTC GGGATGATCA ACTGGATGTT CACCTGGCTC AGGCCCGATG GTGAACTCAA GCACGAAACC ATGGCCCCGA TCGTGGCCGA TCTGTTTTTC GGCGGCGTAG TGGCCGTGCA ACTGCCGCCT TCATCCGCAG CCATTTCATC CAAGGAGACA AACCCATGA
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Protein sequence | MARGRSPGYD EQRDMIARHA AALFAQRGYP ATSMNEVAQA CGLSKPTLYH YFRDKYHLLL HIADDHVSRL QALVDDIGQR QLPPEPRLRA LIERFVQEYA QARDAHRVLT EDVKFLQPED SALVLNKERA VVAAFANALA QMRPETEAAG LTKALTMLLF GMINWMFTWL RPDGELKHET MAPIVADLFF GGVVAVQLPP SSAAISSKET NP
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