| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3867 |
|---|
| Symbol | |
|---|
| ID | 4694850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4263389 |
|---|
| End bp | 4264066 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639851615 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_998593 |
|---|
| Protein GI | 121610786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.53155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.151589 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGCT TGCACACACA GTCTTCTGAA GCACCCGGCG CCGCGACCGA TGCTGCCCGC
GTGCGACGCA CCCAAGCCGA ACGCGTCGCA GAGTCAGACC GCCGCTTAAT GGAGGCAACC
ATTCGGCTAA TCGCCCGCAT CGGCTACACC CACACCACGC TCGAGTCAAT CGGCATCGAG
GCCGGCTACA GCCGCGGCCT AGTTCAACAC CGGTTCGGCA GCAAAGAACG GCTGCTGGAA
GAACTGGTCA ACAAGATCGC CACGGACCAC CGAGTGCGGT TGCTGGCACG GCTGAAAGGA
CTGCGCGGTA TGGCAGCGCT GTCCTGCGAG ATCGACTGTT ATCTCGAAGG CATGGACACA
CCGCCCGAAA GTTCTCGTGC GTTCTTCATG CTGATGCAGG AGTCAATCGG CCCCGCACCA
CGCGTACGGA GTACCTTCGC TGCCATCAGT GTCCGCTGGC ACCGGGCTTT GGCAGGCCAG
ATCGAAGCAG GCCAACAGGC CGGCCAGATC CGCCCCGACA TCAACCCGGC GCGTGAGGCA
CAACTGCTGA TTGCTGCACT GCGCGGCCTG CGCATGCAGT CCATGCTGAG CCCGCAAACC
AGCAACATCG CGCTTGCCAT CCAAGCCCTC AAGAACGACC TGCACACAAG ACTAGCGGCC
GCCTGCGCCG AACGCTAG
|
|---|
| Protein sequence | MQCLHTQSSE APGAATDAAR VRRTQAERVA ESDRRLMEAT IRLIARIGYT HTTLESIGIE
AGYSRGLVQH RFGSKERLLE ELVNKIATDH RVRLLARLKG LRGMAALSCE IDCYLEGMDT
PPESSRAFFM LMQESIGPAP RVRSTFAAIS VRWHRALAGQ IEAGQQAGQI RPDINPAREA
QLLIAALRGL RMQSMLSPQT SNIALAIQAL KNDLHTRLAA ACAER
|
|---|
| |