Gene Veis_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3834 
Symbol 
ID4692253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4232455 
End bp4233231 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID639851583 
ProductABC transporter related 
Protein accessionYP_998561 
Protein GI121610754 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.185359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA GCACACAGCC CTTGCTTGTG CTGAGCGATG TGCGCAAGAC CTTTGGCGGC 
GTTACGGCGC TCAAGGGCAT CAGCTTTGGT GTGGGTGCGC GTGAGGTGGT GGGGCTGATC
GGCCCCAATG GTTCGGGCAA GTCCACCTGC GTGAATGTCA TTTCGGGCGC ACTGCCGCCC
ACCCAGGGGC AGATCAGCCT CGAGGGACAG CGCATCAGCG GTCTGCCAGC CCATCAGGTA
GTGGCCCGAG GGCTGGCCCG GACCTTTCAG ACAACGCAGT TGTTTGGCGA ATTCAGCGCG
CTCGACAATG TGCTGGTGGG GGCCAATGTC TGCCAGCGCC AGGGCTTGCT GGCGCAGATG
CGGGGTTGGC GCAGTGCGCG CCGCGATACT GCGGATGCGC AGGTCCGGGC GCTGGAATTG
CTCGAATTCA CAGGCTTGGC CGACGAGCGC GATGTGCCGG CGCGCCGGTT GCCCGTGGCC
CGGCAGCGCT TGCTGATGAT CGCCTGTGCT TTGGCCAGCC GGTCTTCGGT GTTGTTGATG
GACGAACCGG CAGCGGGCAT GGTCGCCAGC GAGCGGCGCA TGCTATCGGC ATTGATCCGT
CGACTGCCGC GACGCAATGT GAGCGTGATG GTGATCGAAC ACCATATGGC GCTGATCATG
GAGGTCTGCC AGCGCATCGT CGTTCTCAAT TTTGGTGAAA AAATTGCCGA AGGCACGCCC
GCCGAGATCC GGGCCAATCC CGCCGTGATC GAGGCTTACC TGGGACACCA GCAGTGA
 
Protein sequence
MSGSTQPLLV LSDVRKTFGG VTALKGISFG VGAREVVGLI GPNGSGKSTC VNVISGALPP 
TQGQISLEGQ RISGLPAHQV VARGLARTFQ TTQLFGEFSA LDNVLVGANV CQRQGLLAQM
RGWRSARRDT ADAQVRALEL LEFTGLADER DVPARRLPVA RQRLLMIACA LASRSSVLLM
DEPAAGMVAS ERRMLSALIR RLPRRNVSVM VIEHHMALIM EVCQRIVVLN FGEKIAEGTP
AEIRANPAVI EAYLGHQQ