Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3732 |
Symbol | |
ID | 4691651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4125849 |
End bp | 4127195 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639851487 |
Product | DNA repair exonuclease-like protein |
Protein accession | YP_998465 |
Protein GI | 121610658 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.105353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCAAA TCCGGCTCGC CCACATGAGC GATCTCCACT ACTCGCCCGG CAACCTCGAA GAGTCCGACC GCTGCCTGAC TGCTGCGGTC ACGGGCGCCA TCGAGGCCAA GGTGCAATGC GCCATCATCA CCGGCGACAG CACGGATCAC GCGCTCGAAG CGCACCAGCC AGCGGTTCGC GCTCTGGCCC GGCAGGTTCA GCGTCTGGCC GATCACTGCC CGGTGCTGAT GCTGCAAGGC ACACTCTCCC ATGAGCCGCC CGGCTTCCTG CGCATGCTGT CCATGCTGGC CTCGCGCCAT CCGATCACGA TCGCCGAGCG TGTCGGCAGT TTCGGCCTGC GCCTGGACGG CAAGGCCATC GAACCGGTAC AGGCGCAGGC GCAGTACGCC GTGGTGTTTC ACACACTGCC GACGCTCAAC AAGGCGGACA TCGCCGCGAT GGGCAAGGGC ACGATGGATG AATCGCCCCA TGTCCTGGCC CGCCGCGTCG TCGCCGATGT GCTGGAGTCC TGGGCTGCGG TGAATCGCAA GTTGCGCGCG TCCGGCATTC CATCGATGGT CCTGGGCCAT GGCACGGTAT TCGACTCGGT GAGCGAACAT GGCGTTCCCA TGGCAGGCAC GGACCACGAG TTGGGCCTGG GCTCGCTGTT CGCATCCGAG GCGGTGGCAG TGGCCCTGGG GCACATCCAC AAGCAGCAGC AGTGGCGCGA GAGCATCCAT GGTGTCGAGC AGATCGTGGC CTACGCTGGC TCGATCGGTC GATTTCACCA CGGTGAGCAA GGCGACAAGT TCTGGCTAGA GTGGGTGCTG CAAGCCAATG CGGCCCAACT CGTCAAGCAC GCAACGCCGT CCAAGCGCAC GGTCGATCTG GAGTTCGAGG GCATTCCTGA CCTGGACTGC CTGCGTGCGC GCGCACGCGA CTGCGAAGGC GCTTGCGTGC GTGTCCGCTA CCTGGTGGAC GAAGAGCAGC GCCAGAAGGT CGATCGCAAT GCCATCCGGG AGATTCTGCA AGCGGCAGGC GCGAAGGACG TGCAGATCGA GGGCAAGACC GCGATCGTGC AGCGCCAACG CGCAGCGGGT ATCTCGACCG TGGGCCTGGA GCAAAAGCTG GGCATCTGGT GCGAAGCCAC CAAGACCCCG GGCGCGCAGG AGTTGCAGTC GCGGCTGGCA ACGCTGCTGA TCGATGAGCC CGAGCAGATC GCTGCCGGCC TGCTGGCGAC ATTGACATCG CCAGAGACGC TCGCACAGGC CGCGCCTGTT GCCGGCACAA CCCCGGTGCG TGTCAAGGAA TATGGCTCGT CCGGCTCGTC CAGCGTGGAT GACCGGCAAA CCCTGGACAT GTTCTGA
|
Protein sequence | MKQIRLAHMS DLHYSPGNLE ESDRCLTAAV TGAIEAKVQC AIITGDSTDH ALEAHQPAVR ALARQVQRLA DHCPVLMLQG TLSHEPPGFL RMLSMLASRH PITIAERVGS FGLRLDGKAI EPVQAQAQYA VVFHTLPTLN KADIAAMGKG TMDESPHVLA RRVVADVLES WAAVNRKLRA SGIPSMVLGH GTVFDSVSEH GVPMAGTDHE LGLGSLFASE AVAVALGHIH KQQQWRESIH GVEQIVAYAG SIGRFHHGEQ GDKFWLEWVL QANAAQLVKH ATPSKRTVDL EFEGIPDLDC LRARARDCEG ACVRVRYLVD EEQRQKVDRN AIREILQAAG AKDVQIEGKT AIVQRQRAAG ISTVGLEQKL GIWCEATKTP GAQELQSRLA TLLIDEPEQI AAGLLATLTS PETLAQAAPV AGTTPVRVKE YGSSGSSSVD DRQTLDMF
|
| |