Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3697 |
Symbol | |
ID | 4693385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4088750 |
End bp | 4089445 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639851452 |
Product | hypothetical protein |
Protein accession | YP_998430 |
Protein GI | 121610623 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3701] Type IV secretory pathway, TrbF components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.477801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA AAGGCAGCAG GCTCGCACCG CCCGATCATG TTCCAGGCCC CATGGAGCAG GCGGCGGCGC AGGCTTACTT CGAGCGCGGC TCCAGCCAGG CCATGGGCGC GCTCTATTGG CGCATGACGG CCATCGTCTG CCTGCTGATC GTGCTGGTCA TGGCTGCGCT GGCCACCGTC ATCGCTTCAC GCCAGGAAGT GGCCGTGATG CAGGTGAGCA AGGATATGTC CGGGGAGTTG CAAGTCGTCG GGGTCGCCCG CGCTTTCAGC CCGGATGAGG ATTCCAAAAT GGCCTGGGCC GCCAGCTATG CCCAGACCCT CACGGAAGTC ACCCCGGCGA TCTGGCGCCG CAACGTGGAT CGCTTGGTCA GGCTGTCCAC TGGAGTGGCG CTCGATCAGG CGCGCTCGTA CCTGCACCAG CAGGATACGA ACCCGGCCGC TTTGCTCGAC AAGAACCCGC TGTACGTGCG CGAGTTCCAT CGCAAGTCGG TGAACAAGGT GACCGACGAC ACCTACCTCG TGCGCTACGA CCTGGTATCG CGTCCGCAGC CGAACACGGC GCCATCGACG AAGTCCTTCT CGATGTCGCT GACGCTGACC TCCGTGGGCC ACAAGAGGCG CGAGGACGTG TTCAACAACC CCGCAGGTCT GGCGGCGCTG AACTTCTCCA TCTCCGAGGA AACGGGCAAC CAATGA
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Protein sequence | MKPKGSRLAP PDHVPGPMEQ AAAQAYFERG SSQAMGALYW RMTAIVCLLI VLVMAALATV IASRQEVAVM QVSKDMSGEL QVVGVARAFS PDEDSKMAWA ASYAQTLTEV TPAIWRRNVD RLVRLSTGVA LDQARSYLHQ QDTNPAALLD KNPLYVREFH RKSVNKVTDD TYLVRYDLVS RPQPNTAPST KSFSMSLTLT SVGHKRREDV FNNPAGLAAL NFSISEETGN Q
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