| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3589 |
|---|
| Symbol | |
|---|
| ID | 4694860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3964988 |
|---|
| End bp | 3966046 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639851344 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998325 |
|---|
| Protein GI | 121610518 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0617372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGAC ACGAGGAACT GGCGCGCAGC TTCGACCTGC TGGTGATCGA CCATCCCTTC
ATCGGGCAGG CCGATCGGAC CGGCTGCTTT CGCGATCTCC GTGAACTGAT CGCCGCCCCT
GTGCTGTCGC GGCTGACGGC ACAGGGCGCA GGCCCGTCCG GCCAAGCCTA TGTCTGGCGC
GGCAAGGTCT TCGCGCTGCC CACGGATGCC GCAGCCCAGG TCGCCAGCTA CCGCGAAGAC
CTGCTCGCCG ATCTTGCGCC CGAGCCGCCC AGGCGCTGGG CCGATGTGCT GCTGCTGGCC
GAGCGCGCAC GCGCAAACGG GCAGACGCTG TCCTGGGCCG GCACACCGAC CGACGCCGCC
TGCACCTTTC TGACGCTGGC CGCCAACCTG GGGCACCCGC TGGGCCGCAA CGAAGGCGAG
TTCCTGCCGG CCCATGTGAC CGAACAGGTC ATGCGGCACC TGCACTGGAT CGTGCAACAT
GCGCAGCCGT CCTGCCTGGT CGACAACCCG ATCCGCGTGT ACGAGGCGAT GCTGGCCGGC
GAGCGCATGG TCTATTGCCC TGCGGCCTTT GGCTACTCCA ACTACGCGCG CCAAGAGCGC
AGGCCCTGGC TGCGGTTCGC GCCGCTGGCC GGGCCGGGTG CCGAGCCATC GTGTGGCGCC
CTGCTCGGCG GCGCCGGCAT GGCGATCTCC AGCCACAGCG TGGCACCGCG CGCGGCCGCC
GCCTTTCTCG CCTGGTTGCA CAGTGCCAAA GTGCAGCGCG GCCTCTACGC CAGCGCCGGG
GGCCAGCCCG GCAACCTGGC TGCCTGGCGC GACCGGAGCG TCAACGCCAT GGCCCGCGAC
TTCTTCGCCG CCACGCTGAC GACACTCGAA GCCGCCTGGG TGCGCCCGCG ATTCGCCGGC
ATCGTTGCCT TCGTGGAAGC CGCCGGCGGC GAAATCAACC GCTGTCTGCG CGGTCAGACC
GACATGCGCC GGCTGCACCG AGCGCTGACC GCGCTGTACC ACCAAGCCTG GGCGGAGCGC
GGCCAGGCGC TGTCGCCGGC GCTGAAACAC GCACCATGA
|
|---|
| Protein sequence | MTRHEELARS FDLLVIDHPF IGQADRTGCF RDLRELIAAP VLSRLTAQGA GPSGQAYVWR
GKVFALPTDA AAQVASYRED LLADLAPEPP RRWADVLLLA ERARANGQTL SWAGTPTDAA
CTFLTLAANL GHPLGRNEGE FLPAHVTEQV MRHLHWIVQH AQPSCLVDNP IRVYEAMLAG
ERMVYCPAAF GYSNYARQER RPWLRFAPLA GPGAEPSCGA LLGGAGMAIS SHSVAPRAAA
AFLAWLHSAK VQRGLYASAG GQPGNLAAWR DRSVNAMARD FFAATLTTLE AAWVRPRFAG
IVAFVEAAGG EINRCLRGQT DMRRLHRALT ALYHQAWAER GQALSPALKH AP
|
|---|
| |