| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3544 |
|---|
| Symbol | |
|---|
| ID | 4690303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3919585 |
|---|
| End bp | 3920268 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639851300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998281 |
|---|
| Protein GI | 121610474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATGCGC GCTCAAGCTT GGCGCGCGTA ACCGTTCGGG CTTCACGAAG ACCAGCGCGG
CGGCCGTGCG TTCTGTACTC AGTCACGGGC TCCATCACCC CAGCCGCTAC CAAACTGCAC
GGGCCCGTCT GGCCGCCTCA ACGGCGTTCA GACTCTACCG CGCTGGGCCG GTTTAAAGAT
ACAAGCTATT GGCTGCCCAC GGTGGTCAAG GGCTTTGGCG TCGGCAACAC GAACAACGGG
CTGCTCAATG TGATCCCGTG GGTGCTGGTG GCCATCGGTC TGTACGCCGT TCCCCGGGCG
GCCGCGCATG CCGCCTCGAA GACACCCTAC ATCGTCGCAC CGGCATTCTT CGGGGCCCTT
TGCCTGCTGT TGTCGGCGCT GTTGCAAACC CCGGCGCTGC AGTTCATGTT CCTGTGTCTG
GCAGCGGCCG GCATCTTCTC GGGGGTGCCG GTTTTCTGGA GCCTGCCGAC GCGCTTTCTC
AAAGGCGCCG GCGCAGCGGC CGGATTGGCC GCCATCAACT CCGTCGGCAA CCTGGGAGGC
TTCATCGCCC AGAACGCAGT GCCATGGATC AAAGACCGCA CCGGCAGCAC GATCGCGCCC
ATGTTCTTCC TGGCGGCATG CCTGGCACTC GGCGCCACTC TGGTGCTGAT CGTGACCCGA
TCGACCGCGC GCAGCCAGCG CTGA
|
|---|
| Protein sequence | MHARSSLARV TVRASRRPAR RPCVLYSVTG SITPAATKLH GPVWPPQRRS DSTALGRFKD
TSYWLPTVVK GFGVGNTNNG LLNVIPWVLV AIGLYAVPRA AAHAASKTPY IVAPAFFGAL
CLLLSALLQT PALQFMFLCL AAAGIFSGVP VFWSLPTRFL KGAGAAAGLA AINSVGNLGG
FIAQNAVPWI KDRTGSTIAP MFFLAACLAL GATLVLIVTR STARSQR
|
|---|
| |