Gene Veis_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3542 
Symbol 
ID4691694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3917814 
End bp3918734 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID639851298 
Productmajor facilitator transporter 
Protein accessionYP_998279 
Protein GI121610472 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.901266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG AGAAGCAACT GATCGGCAAA ATCTCGCGGC GCCTGATCCC CTTCCTGGGG 
CTGCTCTACC TGATCGCGTA CATCGACCGC CAGAACGTCA GCTTCGCCAA GCTGCAGATG
GTCGATGCGC TGGGCATGAG CGAATCCGCC TACGGCCTGG GCGCCTCGCT GTTCTTCATC
GGCTACTTTT TCTTCGAGGT GCCCAGCAAC CTGGTGCTGG CCAAGGTCGG CGCCAGCAAG
TGGTTCGCCC GCATCATCGT CTCCTGGGGG CTGGTGACGG TGGCGCTGGC GTTCACGAAC
AGCCCGACCA TGTTCTACAT ACTGCGCTTC CTGCTCGGCG CATGTGAAGC CGGCTTCTTC
CCCGGGGTGT TGTACCTGCT GACGCTCTGG TATCCCTTCG CTTACCGCGC AGCCATGGTC
GGCCTGTTCA TGATCTTCAG CGCGCTGGCC AACGCCATCG GCGGTCCTCT GGGAGGCATT
TTGCTCGACC TGGACGGACT GCAGGGCCTG GCCGGATGGA AATGGATCTT CATCGTGACC
GGCATCCCCG CCGTCGTGAT GGGCGTGGTC ACGCTCTTCT ACCTTCCCGA CAGCCCGGAC
GAGGTCCGCT TCCTGAGCGC CGAGGAAAAG CGCTGGTTGC ACGAGCAACT CGCCGACGAA
CAAACCCGGA TGGGCGACGC CGGGGGCCAT GCGCTGCGCG CGCTGATGGA TCCACGCGTG
CTGCTGATGT CCCTGTGCTT CATTGCCTTC CCGCTGTCAG CCTACGGACT GAGTAACCGT
CTTCCGAGTC AAGTGCCGTG CAGCGATTTA TCCCAAGGTT TGCCGGTTCT GACCATGGCG
TTGAGCGTGG TCAGGAGTTT GCGCATGCAC GCCACCAGAG CGACCTTGGG CAGCTTGCCG
GCAGCCTTGA GGCGTTCGTA G
 
Protein sequence
MIVEKQLIGK ISRRLIPFLG LLYLIAYIDR QNVSFAKLQM VDALGMSESA YGLGASLFFI 
GYFFFEVPSN LVLAKVGASK WFARIIVSWG LVTVALAFTN SPTMFYILRF LLGACEAGFF
PGVLYLLTLW YPFAYRAAMV GLFMIFSALA NAIGGPLGGI LLDLDGLQGL AGWKWIFIVT
GIPAVVMGVV TLFYLPDSPD EVRFLSAEEK RWLHEQLADE QTRMGDAGGH ALRALMDPRV
LLMSLCFIAF PLSAYGLSNR LPSQVPCSDL SQGLPVLTMA LSVVRSLRMH ATRATLGSLP
AALRRS