Gene Veis_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3512 
Symbol 
ID4693090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand- 
Start bp3884601 
End bp3885272 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID639851269 
Producthypothetical protein 
Protein accessionYP_998250 
Protein GI121610443 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0582986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.284426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAG TCTCTCGCGA AGCCGTCGGT GCCGGCTTTT CCATGCCCGC CATGCTGCGG 
GCGCGCAGCC TGTCGTTGGC GGCGGTCGAG CGCATCGCGC GGGCGATCCG GCCCGGCATG 
ACGCAGGACC AGGCCACCGG GCTTGCCATG CAGGTGCTGC AGCAAATGGG CATGCAGCGC 
ATCTGGCATC GCACGCTCGT GCGTTTCGGC TGCGACACGC TGAAGATGTT CAACGAGCCG 
GTCGCGGCAG AGAACATCCT CGGCGCGAAC GATATTTTCT TCATCGACAT CGGGCCGGTG 
TGGGACGGGC ACGAAGGCGA CGCCGGCGAC ACCTTCGTCG TCGGCGATGA CCCCGAAATG 
GCCGCCTGCG CGCAGGCGGC ACACCAGTTG TGGCGCGAAG TCAGCGATCG CTGGCGACGC 
GATGGCCTCA GCGGCGAGGC GCTGTACCGA TACGCCGAAG AACGCGCCCA AGCACTGGGC 
TGGCGCCTGA ACCTGGAGGT CAAGGGGCAT CGCGCCTGCG ACTTTCCGCA TGCCATCTAC 
AAGGCGGGCA GGCTCGGCGA CTTCGGCCTG TGCCCGACGA CCGGACTTTG GGTTTTGGAG 
ATACAGATCG CGCACCCGCA GCGCCCTTTC GGCGCGTTCT TCGAAGATCT GCTCAGCGCC 
GATCCATCCT GA
 
Protein sequence
MDAVSREAVG AGFSMPAMLR ARSLSLAAVE RIARAIRPGM TQDQATGLAM QVLQQMGMQR 
IWHRTLVRFG CDTLKMFNEP VAAENILGAN DIFFIDIGPV WDGHEGDAGD TFVVGDDPEM 
AACAQAAHQL WREVSDRWRR DGLSGEALYR YAEERAQALG WRLNLEVKGH RACDFPHAIY 
KAGRLGDFGL CPTTGLWVLE IQIAHPQRPF GAFFEDLLSA DPS