Gene Veis_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3340 
Symbol 
ID4692245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3723820 
End bp3724167 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content63% 
IMG OID639851102 
ProductFis family transcriptional regulator 
Protein accessionYP_998087 
Protein GI121610280 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0220976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.437854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC GCGTGATCGA CGGCATCGAG ATTGAAGAAA GCTCGGGCAA CGTGTATGCC 
GACCTGGGAA TGCCGGATGC CGAGGAAATG TTGGTCAAGT GCCATCTCGC CATGAAGATC
GAAGAAATCA TCAAGTCGCG CCGCTGGACG CAGCAGCAGG CCGCCGAGGT GCTGGGGATG
CCTCAGCCCA AGCTGTCCAA GATGCTGCGC GGCCAGTTCC GGGGCATCAG CCAGGCCAAG
ATGCTCGAAT GCCTGAACCT GCTGGGCCGC GACGTGCAAA TCGTGGTCGG CCCGGCCCGG
CGCACCCGTG CGCGCGCTGC TGGGCGGCTT GATGTGGTCT TTGCCTGA
 
Protein sequence
MKTRVIDGIE IEESSGNVYA DLGMPDAEEM LVKCHLAMKI EEIIKSRRWT QQQAAEVLGM 
PQPKLSKMLR GQFRGISQAK MLECLNLLGR DVQIVVGPAR RTRARAAGRL DVVFA