| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2978 |
|---|
| Symbol | |
|---|
| ID | 4692127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3325579 |
|---|
| End bp | 3327198 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639850737 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_997730 |
|---|
| Protein GI | 121609923 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.388387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCTG ACCGTCCCAC ACCCGAATCC CGCCGTCAAT TCCTGCGCCA GGCCACGCTC
GGCACCGGCG GCGCCCTGCT GGCGGCAGGT CCATTGTCCA GCGTGCTCGC GCAGCAACAG
GCGCCGGCCG TCATCACGGC CGAGCGCCTG CGGCCGCAGG TGCGCAGTGG CGCGATGAGC
GGCGACACCA CGCGCGACGC AGCCATGCTC TGGAGCCAGA CCGACCGCGT TGCGCGCATG
GTGGTGGAGT ATTCGGCCCA CGAGAATTTC AAGAACGCGC AAACCATCAC CGGCCCGCTC
GCGCTGGCGC GCAACGACTA CACCGCGCGC GTCGATTTGC GCGGCTTGCC GGTGGCGCAG
CGGCTGTACT ACCGCGTGCG TTTTCAGGAT CTGCAGCACA AGTCGGCCTG GAGCGAGCCG
GTGACCGGCA GCCTGATCAT CGCGGGCGGC AGCGGGCGCG ACATCAGCTT TGCGTTTTCG
GGCGACGAGG CCGGACAGGG CTGGGGCATC AACGAAGCCT GGGGCGGCTA TCGCGTGTAC
GAAACGATGC GCCGTTTCCA GCCCGATTTC TTCATCCACT CGGGCGACCA GATCTATGCC
GATGGCCCGA TACAGGCCGA GGTGACACTC GACGACGGCA GCATCTGGCG CAATCTGGTG
ACGCCTGCCA AGGCGAAAGT GGCCGAGACG CTCGACGATT TTCGCGGCAA CTTCGCCTAC
AACCTGCTGG ATGCGAACAA AAAGAGATTC ATGGCCGAAG TGCCCTTCCT GGTGCAATGG
GATGACCACG AAGTGCGCAA CAACTGGTGT CCCGACCAAC GCATTGACGC GGCGGACAAG
CGCTACCAAG AGCGCGATTT GAATCTGCTG ATGCAGCGCG CGCGCCAGGC CATGTTCGAG
TACAACCCGT TTCGCATCGA CAGCGCCGAT CCGCAGCGCA TCTATCGCTC TTTCGACTAC
GGCCCCTTGC TGGAGGTGTT CATGCTCGAC GAGCGCAGCT ACCGCAGCGC CAACTCAGCC
AACGCCCAAG ACCGGCAAGG CGCAGATACC GCTTTCCTCG GCACGGCGCA AATGCGCTGG
CTCAAACAGT CGCTGCGGCG CTCGCGCTCG ACATGGAAAG TGATCGCCAG CGACATGCCG
CTGTCGATCG TCGTTCCCGA CCTGAACCCG GGTGTGCCGC CAGACACTTA CGAAGCCTGG
GCCAACGGCG AGCACGGCAT GCCCCTGGGC CGCGAACTGG AAGTGGCTCG ACTGCTGCGC
TTCATCAAGC ACCACCAGAT CAGGAATGTG GTGTGGGTGA CCGCCGATGT GCACTATGCG
TCGGCGACTC ATTACACGCC GCAGAAGGCG CGCTTTACCG ACTTCGAGCC GTTTTGGGAG
TTTGTCGGCG GGCCGCTGCA TGCCGGCTCT TTCGGCCCGG GCAAGATCGA CCGGACATTC
GGTCCGGATG TGCGCCATGT CAGCATCCCG ATGGACATGA AGCAAAACCG TCCGCCCACC
GAATTGCACC AGTTCTTCGG CATCGGCAAG ATCGATGCCA AGACCAAAGC CATGACGGTG
TCCCTGCACA ATGTCGAGGG CAACAAACTG TATGGCGTGG AGCTTGCGCC GCAAGCCTGA
|
|---|
| Protein sequence | MPADRPTPES RRQFLRQATL GTGGALLAAG PLSSVLAQQQ APAVITAERL RPQVRSGAMS
GDTTRDAAML WSQTDRVARM VVEYSAHENF KNAQTITGPL ALARNDYTAR VDLRGLPVAQ
RLYYRVRFQD LQHKSAWSEP VTGSLIIAGG SGRDISFAFS GDEAGQGWGI NEAWGGYRVY
ETMRRFQPDF FIHSGDQIYA DGPIQAEVTL DDGSIWRNLV TPAKAKVAET LDDFRGNFAY
NLLDANKKRF MAEVPFLVQW DDHEVRNNWC PDQRIDAADK RYQERDLNLL MQRARQAMFE
YNPFRIDSAD PQRIYRSFDY GPLLEVFMLD ERSYRSANSA NAQDRQGADT AFLGTAQMRW
LKQSLRRSRS TWKVIASDMP LSIVVPDLNP GVPPDTYEAW ANGEHGMPLG RELEVARLLR
FIKHHQIRNV VWVTADVHYA SATHYTPQKA RFTDFEPFWE FVGGPLHAGS FGPGKIDRTF
GPDVRHVSIP MDMKQNRPPT ELHQFFGIGK IDAKTKAMTV SLHNVEGNKL YGVELAPQA
|
|---|
| |