Gene Veis_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2915 
Symbol 
ID4692274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3263258 
End bp3263941 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID639850676 
Productisochorismatase hydrolase 
Protein accessionYP_997669 
Protein GI121609862 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.200288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC CGCTGCGCAT CGGGCGCGGC CAGATCGGCG CCCTGTTCAT CGATTTTCAG 
GAGGAGCATC GGCAGGATGC GCGCTATCTG GTCGAGCATT ATGGCGCGGT GCTGGCCAAT
GCCGGGCGGC TGCACGCTGC GGCGCGGCGC AACGCGGCGC CTGTGTATCA CTGCGCTTAT
GTCGTCGACA TGGCCGAGTT CAGTGCGGCA TTGCACCCGG TTCAGCCCGA CGGCAGGTCT
GCCTTTAGCG ACAAGAATGA TCCGCTGACA GCGGTTTGCC ACGAAGTGGC TCCCGGGCCG
AACGAGCGCT TGCTGGTCAA AAATCAGGCC AGCGCCTTTG GCGCCGGCTC GGTGCTCGGC
GCGCAATTGA AGGCGGCCGG CATGCCATGG CTGGCCGTCT GCGGTGTCTG GACCGAAGCC
TGCGTCGCGG CCAGCGTGCA AGACGCCATC CGCCTGGGCC TGCGCGTGCT TTTGGTCAAG
GACGCCTGCG GCAGCGGCTC CGGCGCGATG CACCAGACAG GGATATTGAA CCTGGCCAAC
CGGCTCTACG GCGGCGCGGT GGTCGACACC GGCGCGGCGT GCCGCCTGCT CGATGGGCAG
ACCGTGGATG CCTGGCAGGT TCAGGGCGCG GTTCCGCTGC GCTACACCTG GGCCGATGCG
GCGGAACTTT ATCGGGCACT GTGA
 
Protein sequence
MKKPLRIGRG QIGALFIDFQ EEHRQDARYL VEHYGAVLAN AGRLHAAARR NAAPVYHCAY 
VVDMAEFSAA LHPVQPDGRS AFSDKNDPLT AVCHEVAPGP NERLLVKNQA SAFGAGSVLG
AQLKAAGMPW LAVCGVWTEA CVAASVQDAI RLGLRVLLVK DACGSGSGAM HQTGILNLAN
RLYGGAVVDT GAACRLLDGQ TVDAWQVQGA VPLRYTWADA AELYRAL