| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2132 |
|---|
| Symbol | |
|---|
| ID | 4692279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2423625 |
|---|
| End bp | 2425292 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639849894 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_996898 |
|---|
| Protein GI | 121609091 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.459231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCTC CGCAGGCCCT GCTCGCCATC GACGCGCTGG GCAAGGACTA CACCGCCACG
GTGCTCGATG GCGTGACGCT GACGCTGAAC GCCGGCGAGG TGCTGGCGCT GACCGGCGAG
AACGGCGCGG GCAAGAGCAC GCTGGCCAAA ATCCTGTGCG GCCTGACGCC GCCCACGCGC
GGCCACATGC GGCTGGCAGG GCAGGTGTAT GCGCCGGCCT CGCGCCGTGA CGCCGAGCGC
CACGGCCTGC GCATGGTGCT GCAGGAACTG GGCCTGGTGC CCACGCTCAC CGTGGCCGAG
AACCTGCTGC TCGGCCGCCT GCCGCAGCGC GCCGGCTGGC TGCGGCGCGC TGCGTTGCAC
AGCGCCGCGC GTGCGCAGTT GGACAGGATC GGCCTGCACC ACCTGGACCC GGCCACGCCG
GTGGCCCGCC TGGGGCTGGG CCAGCAGCAG ATGCTGGAGA TTGCGCGCAA CCTGCAAGAC
GACACCCGCA TCCTGGTGCT CGACGAGCCT ACGGCCATGC TCACGCCGCG CGAGACCAGC
TTTCTGTTCG AGCAGATCGC GCAGTTGACG GCGCGCGGCG TGGCCATCGT CTACGTCTCG
CACCGGCTCG AAGAACTGCG CCGCGTCGCC GACCGGGTGG CCGTGCTGCG CGATGGCCGC
CTGGTGGATC TGCGCCCGAT GGCCGGCCTG AGCGAGGACG AACTGGTGCA GCGCATGGTG
GGCCACTCGG TCAGCGACCT GGAATACCGC CCGCGCCGCG CCGCCGGCCC GGTGGTTCTG
AGCGCCGAGG GCCTGGGCCG TGGCAGCGCC GTTCAGGATG TGAGCCTGCA ACTGCACGCC
GGCGAGTTGT TGGGCATTGC CGGCCTGGTC GGCTCGGGCC GCACAGAGCT CTTGCGCCTG
CTGTTTGGCG CCGACCGGGC CGACCGGGGC TGCATCACGC TGCACCCGCA AGATCGGCCC
ATACCGCCGC CCATACCGTC TGCGGCAACT GCGACATCTG CGGCGTCCAC GGCATCTGCG
GCGCACGACG GCTGGCCCGC GCCTGTCGCC ATGCAGGAAA TGGCCCCTCC CGCGCAATCC
CCGGCCCGGC GCCAGACGCC CGGGGTTTTT TCCTCGCCGC TGCAAGCCAT TGCCGCCGGC
CTGGGGCTGG TCACCGAAGA CCGCAAATCC CAGGGCCTGC TGCTGACCCA GCCGATCCGC
ATCAACGCCA CACTGTCCGA CCTGGGCGCG ATCGCGCGCG GCGGTTGGCT GCAACGCGCT
TTGGAGAACC GGCTGGTGCA AAGCCTGGTG CACAGGCTGG GCATCCGCTG CCGCAATGCC
GAGCAGCCGG TGGGCCAGCT CTCGGGCGGC AATCAGCAAA AGGTGGTGTT TGCCCGCTGG
CTGCACCGGC CCTGCCGCGT GCTGCTGCTC GACGAACCCA CGCGCGGCGT GGATGTGGGC
GCACGCGCCG AGCTGTACCG CGAGCTCGAC CGCATGGCCG CCGAGGGCCG CGCCTTGCTG
ATGGTCTCGT CCGACCTGCG CGAGTTGATG ACCATGGCCG ACCGCATCGG CGTGATGCGC
GCCGGCCGCC TGGTGGCCCT GTTCGAGCGC GGCCAATGGT CCGAGCAAGC GCTGCTGGCG
GCGGCCTTCG CGCACACCGC GTCCAACCCT GCTCCCGTCA CCAGATGA
|
|---|
| Protein sequence | MPAPQALLAI DALGKDYTAT VLDGVTLTLN AGEVLALTGE NGAGKSTLAK ILCGLTPPTR
GHMRLAGQVY APASRRDAER HGLRMVLQEL GLVPTLTVAE NLLLGRLPQR AGWLRRAALH
SAARAQLDRI GLHHLDPATP VARLGLGQQQ MLEIARNLQD DTRILVLDEP TAMLTPRETS
FLFEQIAQLT ARGVAIVYVS HRLEELRRVA DRVAVLRDGR LVDLRPMAGL SEDELVQRMV
GHSVSDLEYR PRRAAGPVVL SAEGLGRGSA VQDVSLQLHA GELLGIAGLV GSGRTELLRL
LFGADRADRG CITLHPQDRP IPPPIPSAAT ATSAASTASA AHDGWPAPVA MQEMAPPAQS
PARRQTPGVF SSPLQAIAAG LGLVTEDRKS QGLLLTQPIR INATLSDLGA IARGGWLQRA
LENRLVQSLV HRLGIRCRNA EQPVGQLSGG NQQKVVFARW LHRPCRVLLL DEPTRGVDVG
ARAELYRELD RMAAEGRALL MVSSDLRELM TMADRIGVMR AGRLVALFER GQWSEQALLA
AAFAHTASNP APVTR
|
|---|
| |