| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2004 |
|---|
| Symbol | |
|---|
| ID | 4691373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2274802 |
|---|
| End bp | 2275698 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639849770 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_996774 |
|---|
| Protein GI | 121608967 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.870521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG ATTTCTTCAA TCTCCCGATG CCGGCGACCG CGCCGAACAC GGCGCCGTCA
CCCAAAGGCC CGGGGCAGTT CAGGGCGCAA CTGACCCGCG GACCGGCGGC GGTCGCCTTG
GCGATTTTTG CCACGGTCGT GCTGCTGGCC CTGTTTGCCC CGCTACTGGG CACGGTGGAC
CCGGTGGCGA TCGATCCGTC GCAACGGCTG GCACCGATCT CGGCCGACCA TTGGCTTGGC
ACCGATGTTT TCGGGCGTGA CACCTATTCG CGTGTGCTGT ATGGCGCGCG GGTGTCGCTG
ATCATTGGCC TGGGCGCCAT GGTTGCGAGC ATCGCGCTGG GCCTGGTGAT CGGGGTGGTG
GCGGGCTACT TTCGCGTGGC CGATGCGATC GTGATGCGGG TCATGGATGG CGTGATGGCC
ATTCCGGGCA TCCTTTTGGC CATCGCGCTG GTCTCGCTGA CCGGCAGCAC GTTGCTGACG
GTGCTGGTGG CGATCACCGT GCCCGAGGTG CCACGGGTGG TCCGGCTGGT GCGCGGCGTG
ATTCTGGGCG TGCGCTCGGA GCCGTATGTG GAGGCCGCCA TCGCGCTGGG CGCGCGCGCC
CCCCGGTTGC TGTTGCGCCA TATGGTGCCG GCCACCGTGG CCCCGCTGAT CGTCCAGGGT
ACGTACATCT TCGCCTCGGC CATCCTGACC GAGGCCACGC TGAGTTTTCT GGGCGCGGGC
CTGCCCTCGG AGACGCCGTC GTGGGGCAAC ATCACGGCCG ATGGCCGGGC CTATTTCCTG
CTCTTTCCGG GCCTGATCCT GTATCCCGGC ATCATTTTGG CGTTGACGTT GCTGAGCGTG
AACGTTCTTG GCGACATGCT GCGTGACATG CTCGATCCAC GCAGCGGAAA GCGGTGA
|
|---|
| Protein sequence | MKTDFFNLPM PATAPNTAPS PKGPGQFRAQ LTRGPAAVAL AIFATVVLLA LFAPLLGTVD
PVAIDPSQRL APISADHWLG TDVFGRDTYS RVLYGARVSL IIGLGAMVAS IALGLVIGVV
AGYFRVADAI VMRVMDGVMA IPGILLAIAL VSLTGSTLLT VLVAITVPEV PRVVRLVRGV
ILGVRSEPYV EAAIALGARA PRLLLRHMVP ATVAPLIVQG TYIFASAILT EATLSFLGAG
LPSETPSWGN ITADGRAYFL LFPGLILYPG IILALTLLSV NVLGDMLRDM LDPRSGKR
|
|---|
| |