Gene Veis_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1963 
Symbol 
ID4692586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2206847 
End bp2208442 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content72% 
IMG OID639849729 
ProductFAD dependent oxidoreductase 
Protein accessionYP_996733 
Protein GI121608926 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTG CCCGAATTCG CCAGGATGAC GCGCTCATCG TCGGCAGCGG CATCAACTCG 
CTGGTGTGCG CGGCGCTGCT TGCGCGCAGT GGCCGCCGGG TGCGGGTTCT GGAGCGCGAG
CGCGTGCTCG GCGGCTGCAT CCGCACCGAT GAACTGACGC TGCCCGGGCT GCGCCACGAC
ACCTTGTCCA CCGCGCATCC GCTGTTCGTG GCGGGGCCGG CCTACGCCTT GCTGGGCAAG
GCCCTGCACG AGGCTGGATT GGCGTACTGC AACACCGATT CGCCCACCGG CGTTTTATTG
CCGGATGGCC GCCATCTGGT GCTGTCGACC GCGCGTGCCG CCAACTGCCA GCGCTTCGAT
CAGGCCCACC CCGGCGACGG CGCCGCCTAC GGCGCGGCGC TCGGCGAGGT CGAGGCCCGG
GCGCCGCTGC TGTTCCCGCT GCTGGGCAAT GAGCTATGGC GCATCGGCAC GGCCCGGGCG
CTGGCCACTG CGGCCTGCCA GCAGGGGCCG CATGCCCTGT GCGGCTTCTT CGGCCAGGCG
CTCACGCCCG CGCGGGCCTG GCTGTCGCAG GCGTTTGGCT CGGACTTGGT CGGCGCGCTG
CTCGCCCCGT GGGTGTTGCA CTGCGGTCTG GGGCCGGACG CCCCTTTGTC GGCGCTGATG
GCCAAGGTCG TGGCGTTCAC GCTCGAAGCC GTCGGCATGC CGCTGGTGCA GGGCGGCAAC
GCGAACACGG TGCGCGCTTT CGAGCGGCTG ATTCGCGCCG CCGGCGGCGA ATTGGAAACC
GGGGCCGATG TCGAGCGCGT GCTGGTCGAG CGCGGCTGCG CCGCCGGTGT GCGCCTGGCC
GATGGCCGCG AGTACCGCGC CCGCGACGTG ATCTGCAACG TCACGCCGAC CCAGCTCTAC
CAGCGCCTGC TCGATCCCGC GCAGGTGCCG GCCGGGATCG CCGCCCAGGC GCGCCAATGG
CGCTACGGCA AGGGCAACCT GCAAATCCAT TTGGCGCTGT CGCAGCCGCC GCGATGGCCC
GATGCGGCGC TGGATCGCGT CGGCTACCTG CACCTGACGA GCGGCGCCGA CGCCGTCTCG
CGCGCGGTCA ACGAGGCCGA GCGCGGCCTG CTGCCGGCCG AGCCTACGAT CTGCGTGGCC
CAGCCCACCG CGCTGGACCC GAGCCGCGCG CCCGAGGGCC GCCACATCCT GTGGATACAG
CTACCCGAAT GCCCGCGCGA ACCCGTTGGC GACGCGGCGG GCCTCATCGC GGTGCCCGCA
GGCGCGCGCT GGACGACCCC GTTGCGCGAA GCCTATGCCG AGCGCGTCAT CGAGCGCCTC
GCGCGCCAGG TGCCGAATTT GCGGGACAGC CTGCTCGCCC GCGCCGTGCT GTCGCCGACC
GACCTGGAGG GCCTGAACAT GAACCTGGTC GGCGGCGACC CCTACGGCGG CGATTGCAGC
CTGGACCAGT CCTTCCTCTG GCGCCCCTTG CGCGCAACGC GCAACCACGA GACACACTTG
GCACACTTGT GGCACATTGG CGCATCCACC CACCCCGGCC CGGGCCTGGG CGGCGGCTCC
GGCTTGCACT TGGCCAAGGC GCTGGGCGCC GCCTGA
 
Protein sequence
MRTARIRQDD ALIVGSGINS LVCAALLARS GRRVRVLERE RVLGGCIRTD ELTLPGLRHD 
TLSTAHPLFV AGPAYALLGK ALHEAGLAYC NTDSPTGVLL PDGRHLVLST ARAANCQRFD
QAHPGDGAAY GAALGEVEAR APLLFPLLGN ELWRIGTARA LATAACQQGP HALCGFFGQA
LTPARAWLSQ AFGSDLVGAL LAPWVLHCGL GPDAPLSALM AKVVAFTLEA VGMPLVQGGN
ANTVRAFERL IRAAGGELET GADVERVLVE RGCAAGVRLA DGREYRARDV ICNVTPTQLY
QRLLDPAQVP AGIAAQARQW RYGKGNLQIH LALSQPPRWP DAALDRVGYL HLTSGADAVS
RAVNEAERGL LPAEPTICVA QPTALDPSRA PEGRHILWIQ LPECPREPVG DAAGLIAVPA
GARWTTPLRE AYAERVIERL ARQVPNLRDS LLARAVLSPT DLEGLNMNLV GGDPYGGDCS
LDQSFLWRPL RATRNHETHL AHLWHIGAST HPGPGLGGGS GLHLAKALGA A