| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1904 |
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| Symbol | |
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| ID | 4692754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2133132 |
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| End bp | 2134334 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639849671 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_996675 |
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| Protein GI | 121608868 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.4347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCC GCCGCCGTTT CGTGTCGCAG TCCGCCGCCG TGGCCAGCGC CGTCGCCTTT
CCACTCGTGG CCGGAGCGCA GCCCAAGACT GTCAAGGTCG GCGTGCTGCA TCCGGTCACC
GGGGCGCTGG CCTACTCGGG GCAGCAGTGC CGCCTCGGCG CGCTGATGGC CATCGGGGAC
ATCAATGCCG CAGCCGGCAT CGAGTCGCTC GGCGGCGCCA AGCTCCAGGC ACTGCTCGGC
GACGCTCAGT CGCAGCCGCA GGCCGGTGCG GCCGAGGTCG AGAAAATGAA CGAAGCGGGC
GTCTCGGCCA TCGTCGGCGC CTACGCCTCG GCGATCTGCC TGGCGACCAC GCAGGCAGCG
GCCAAGTACG GCCTGCCGCA TGTGGTCGAT GTCGGCGTGG CCGACCAGAT CGTCGAGCGC
GGCCTGAAGA ACAGCTTTCG CTTCGGCTGC GGCTACAAGA AGTCCACCGG GGTGGCCATG
GCCAACCTGA TGCTGCTCAA CAAGGCCGCA GGCAGCCCGG CCAAGACGGT GATGATCATT
CACGAGGAAT CGCTCTTCGG CGTCGGCACC GCACAGTTGC TCGCGCGCGA GTTGCCGGGC
TACGGCTTCG ATGTGAAAGA GGTGGCAAAG CATGCCAACC CCACGCGCGA CTTCAACAAC
ATCGTGCTGC GCATGAAATC GGTCAACCCC GACATCGTCA TTCCCGCCAA TTACTACAAC
GAGTACGCGC TGCTGGTGCG CACCATGCAG CAGCAAAAGG TGGTGCCCCA AGCCATCTTC
TCGGTGCTGG GCGGCGCCGC ATCGAGCTAC AAGTTCGTGA AGGAATTCCC GGACGCGGCC
AACGGCATCA TCGACTGCAA CCATTGGTTC AACCCGAAGG ACCAGCGCGC ACAGCAACTG
CGCGAGCGCG TGCAAGCCAA GGGCCAGTTC TTCAGCTACG AGGTCTTCAT GACCTACACC
GCCATGTGGC TGCTGGCCGA TGCCATCGGG CGCGCCAAGT CCATGGAACG CGCCGCGATC
ATCGACGCGC TGGACAAGAG CAACTTCTCG AACCACATCA TGCCGTATGG CCCGACGAAG
TTCGTCAACG GCCAGAACGA GGGCGCGCAA CCGCTGATGA CGCAGGTCGT GAAGAACGAC
ATCAAGGTCA TCATCCCGCG CGAGTACCGC GAGGTCGACC CGATCTTTCC GCTCAAAGCC
TGA
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| Protein sequence | MQSRRRFVSQ SAAVASAVAF PLVAGAQPKT VKVGVLHPVT GALAYSGQQC RLGALMAIGD
INAAAGIESL GGAKLQALLG DAQSQPQAGA AEVEKMNEAG VSAIVGAYAS AICLATTQAA
AKYGLPHVVD VGVADQIVER GLKNSFRFGC GYKKSTGVAM ANLMLLNKAA GSPAKTVMII
HEESLFGVGT AQLLARELPG YGFDVKEVAK HANPTRDFNN IVLRMKSVNP DIVIPANYYN
EYALLVRTMQ QQKVVPQAIF SVLGGAASSY KFVKEFPDAA NGIIDCNHWF NPKDQRAQQL
RERVQAKGQF FSYEVFMTYT AMWLLADAIG RAKSMERAAI IDALDKSNFS NHIMPYGPTK
FVNGQNEGAQ PLMTQVVKND IKVIIPREYR EVDPIFPLKA
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