Gene Veis_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1684 
Symbol 
ID4692163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand+ 
Start bp1878434 
End bp1879120 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID639849445 
ProductTetR family transcriptional regulator 
Protein accessionYP_996457 
Protein GI121608650 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.828148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATGA ATCGTCGGTC ACACAAAGGA TCGCCCAAGG GCAAGGGGTC GCACGCAGGA 
CAACCGCCTG CCGCCCGCCG CCGGGCCGCA GACGCTGATG ACAAGCGCGA ACGCATATTG 
CGCGCCGCCG AGGCGCTGTT CGACGCACAG GGCTACGCCA GCACCACCAT CGAGCAGATC 
GCGCGGCGGT TGGGGGTGAC CAAGCCCTTC GTCTACTATT ACTTTCGCAG CAAGCAGGAG 
ATTTTCGAGA CCCTGTCCTG GGCCCCTGCC GTGGCCTGCT TCACGAGCAT GGACTTCGCC 
GCCGACGACC TGCGCCCCGC GCATCTGAAG GTGACCGAGG GCCTGGAGCG CCTGATCCGC 
ACCACGCTGG AGCAGCACCC GGCCGCGTTC TTCGTGTACC GCGATCCGCA GGCCTACCGC 
CCGGAATACA TCGCCATGCA AAAGCGGCTG GCCAACCATT TCTACGACCG GCTCTGCGCC 
CTGCTCGATG AGGGGCGGCG CGACGGCATG TTCGAGTTCA ACGACACCAA GGTCACTGCG 
CTGGCGGCCT GCAGCCTGCC GGGCTTTCTC TACCACTGGT ACCGCCCCGA TGGGCGCCTG 
GCGCCAGAGG CGTTGGTGCA GGAACTGGCG CATCTGGCCT GGCGCGTGCT CGGGCTGCGC 
CGCAAGCGCC GCCGCGCGAC GCAATGA
 
Protein sequence
MGMNRRSHKG SPKGKGSHAG QPPAARRRAA DADDKRERIL RAAEALFDAQ GYASTTIEQI 
ARRLGVTKPF VYYYFRSKQE IFETLSWAPA VACFTSMDFA ADDLRPAHLK VTEGLERLIR 
TTLEQHPAAF FVYRDPQAYR PEYIAMQKRL ANHFYDRLCA LLDEGRRDGM FEFNDTKVTA 
LAACSLPGFL YHWYRPDGRL APEALVQELA HLAWRVLGLR RKRRRATQ