| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1571 |
|---|
| Symbol | |
|---|
| ID | 4690436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1758465 |
|---|
| End bp | 1759427 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639849335 |
|---|
| Product | metallo-beta-lactamase superfamily hydrolase |
|---|
| Protein accession | YP_996348 |
|---|
| Protein GI | 121608541 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.993605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000158628 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAG TTCATTTTCT CAACGTGGGG CACGGTGACT GCACGGTCAT CGAGCATCCC
TCTGGGCGCA TCACCGTCAT CGACATCAAC AACGGCAGTG AGCTTGACCC GTTCACGGAA
GCAGAGCTGT TGTCGCGTTA TCGCGTTGAT GGGAGACAGG CTGCCATCTA TCACAGCGTC
GGGCAGCTTC TGGAGCAGGC AGGGTACGGC ATCGAACTTA CCAATCCCAT CGATTTTCTG
ACGATGCGGT TTCACGGGAA ATCGATCTGG CGCTATGTCC AGACGCACCC GGACATGGAT
CACATGCGCG GCATCTCGGT ACTGGATCGG CAGTTCAGCA TCAACAACAT TTGGGATGTC
GAACACTCGA AATGCATCAC GGATTTCTTT CGCGATTCCG ACCGCGATGA TTGGGCGGCG
TACCAGCGGC TGCGCTCGGG GCAGAACGGC ACGAAAGTCA TGAACCTGAT GCGCGGCCAT
ACCGGGAAAT ACTGGTGCGA AGGAGATTCG CCGATGGATA TTGGGGATGG CATCGAAATT
CTGGCTCCGA CACCGCAACT GCTCCGTGAT GCTGGTGACA ATTCCAACTG CATGAGCTAC
GTCCTGCGAC TGACTTACGC TGGCATCAAG ATCATCCTCG GCGGTGACGC CGACGAGGCA
GTATGGGAGG ATATCTACGC GCACTATGAG TATGACTTGA AGTGTCACGT CCTTAAGGCC
AGCCATCATG GTCGTGACAG CGGTTATCAC CGACCCTCGG TCAAGGCGAT GGCTCCGCAA
TACACCATCG TTTCCGTTGG CAAAAAGCCT GAAACCGACG CCAGCAACAA ATATCGGCAG
TATTCTAGTA ATGGAGTTTT GTCAACGCGG TGGTGCGGCA ACATCACATT GACAGTGAAT
CCGGATGGTT CCGGTAATTT GAATGAGAAA TACCAACTGA AGAACACCAA TGCGTCAGCT
TGA
|
|---|
| Protein sequence | MLKVHFLNVG HGDCTVIEHP SGRITVIDIN NGSELDPFTE AELLSRYRVD GRQAAIYHSV
GQLLEQAGYG IELTNPIDFL TMRFHGKSIW RYVQTHPDMD HMRGISVLDR QFSINNIWDV
EHSKCITDFF RDSDRDDWAA YQRLRSGQNG TKVMNLMRGH TGKYWCEGDS PMDIGDGIEI
LAPTPQLLRD AGDNSNCMSY VLRLTYAGIK IILGGDADEA VWEDIYAHYE YDLKCHVLKA
SHHGRDSGYH RPSVKAMAPQ YTIVSVGKKP ETDASNKYRQ YSSNGVLSTR WCGNITLTVN
PDGSGNLNEK YQLKNTNASA
|
|---|
| |